Gene Msil_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3398 
Symbol 
ID7092124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3729127 
End bp3730407 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content59% 
IMG OID643466698 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002363659 
Protein GI217979512 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGT TCAAGGCGAC GCATGTCGTT CTGGCGCTTC TCTGTATCAT GTATTTCATA 
ACCTACATCG ATCGCGTCAA TATCGGCACG GCTGCGGGCG CCATACAGCG CGAGCTAAAT
CTCACGAATA CGCAGCTCGG GCTCGTGTTC TCCGCCTTCG CCTATCCCTA CCTCGTTTTT
CAGGTTTTCG GGGGCTGGGT CGGAGACCGT TTCGGCGCGC GTCGGACGCT GTTCGCATGC
GGGTTGATCT GGGCGGTGGC GACCATTCTG ACGGGTCTCG TCAACGGTCT CTTCACATTG
TTCCTCGCGC GCCTACTGCT TGGCTTCGGC GAGGGCGCAA CCTTCCCAAC GGCCACCCGG
GCCATGCAAT ATTGGACGCC CCCGAGCCGT CGAGGCTTCG CCCAAGGGCT GACCCATGCT
TTCGCCCGAC TCGGCAATGC GGTCACGCCG CCTTTCGTCG CGCTCTTGGT GATCGCCTTC
AGCTGGCGTG GCTCTTTTGT CCTGCTCGGC CTCATCAGCC TGGTGTGGGT GCTGGTCTGG
GTTTGGTACT TTCGGAATGA TCCGAAGGAT CACTCCGGCA TCACGGAGGA AGAACTCGCG
CAGCTGCCCG TTCGCAAACC GGGCGCCAAG CTTCAAATTC CGTGGAAGCC TCTGCTGGCC
CGGATGTGGC CGGTGACGCT CACTTATTTT TGCTATGGCT GGACGCTTTG GCTTTACCTC
AACTGGCTCC CGCTGTTCTT CAAGAACAAT TTCGGCCTGG ATCTCAAGAG TTCCGCTCTT
TTTGCGTCGG GTGTGTTTTT TGCGGGCGTC GTTGGAGACA CGCTCGGCGG AGTCATCTCG
GATCACATTC TGCGTCGCAC GAACAATGTT CGACTTGCGC GGCTGAGCGT CACGATCGGA
GGATTTCTCG GCGCCTTCCT ATCGCTTCTG CCACTGCTCT ACATCCACGA CGTCACGTTG
GTCGCGCTCT GCTTGTCGGC GGGCTTCTTC TTCGCGGAAT TGGTCATCGG CCCGATGTGG
TCAATCCCCA TGGATATTGC GCCGAAATAT TCCGGGACGG CTGCCGGGCT CATGAATACC
GGCTCCGCCG CTGCGGCGAT CGTGTCCCCA CTGGTCGCCG GGTTTGTGAT CGACGTCACG
GCAAATTGGT TTCTACCGTT CCTCATGTCG ATGGGATTAC TTCTCGTCGG AGCGGCATGC
GCCTTTATGA TGCATCCTGA GAAGCCGTTC GAGGAACATG AAATGGTGGG TGGAACGGCA
AAACTGGCGC CCGCCGAATG A
 
Protein sequence
MPKFKATHVV LALLCIMYFI TYIDRVNIGT AAGAIQRELN LTNTQLGLVF SAFAYPYLVF 
QVFGGWVGDR FGARRTLFAC GLIWAVATIL TGLVNGLFTL FLARLLLGFG EGATFPTATR
AMQYWTPPSR RGFAQGLTHA FARLGNAVTP PFVALLVIAF SWRGSFVLLG LISLVWVLVW
VWYFRNDPKD HSGITEEELA QLPVRKPGAK LQIPWKPLLA RMWPVTLTYF CYGWTLWLYL
NWLPLFFKNN FGLDLKSSAL FASGVFFAGV VGDTLGGVIS DHILRRTNNV RLARLSVTIG
GFLGAFLSLL PLLYIHDVTL VALCLSAGFF FAELVIGPMW SIPMDIAPKY SGTAAGLMNT
GSAAAAIVSP LVAGFVIDVT ANWFLPFLMS MGLLLVGAAC AFMMHPEKPF EEHEMVGGTA
KLAPAE