Gene Msil_3379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3379 
Symbol 
ID7092105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3710148 
End bp3711104 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content62% 
IMG OID643466683 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_002363644 
Protein GI217979497 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT TCCCCTTGAA TTACCTTACG GGATACGGAG CCCGGGCTCT CGCTATCCTG 
CCGCTAACGA AGGGGATGAT CGCAATTTCG TCGATCGTGA CGCTCGTCGT GGCTCTATTG
CTGCTCGGCG CCATATTCCG ATCCCGCGCC GCTTTCGACC CGCGCGGTCT TGTCCAGGAC
ACGGGGCCGC TTCGATGGGT CTATCTAGGC GCGGCCCTGA CCGTCGCGGC GCTTGCCGGC
GTGCTTGTCT GGACCATGAC CACCATGGCT GCGGCCGTGC GCACGGGACC GGAGGCGGCG
CTGTCGCTCG AGGTCACAGG GCGGCAATGG TGGTGGGAAG TCCGCTACCT TGACAGGGCT
CATCCGTCAA ACATCTTTAC GACCGCCAAT GAAATTCATA TTCCCATCGG TAAGTTCGTC
CGCGTTGATC TGCGTGGCGG CGACGTGAGC CACTCATTCT GGGTTCCCGC CTTGGGCGGC
AAGACCGACA TGATTCCGGG CCAGGTCAAC ACGACCTGGC TGCAGGCAGA TAAAGTCGGA
AGCTATCGTG GCCAGTGTTC CGAATATTGC GGAAAGCAGC ATGCGCACAT GGCCTTCACC
GTAATTGCGG AGAGCGAGGC GCAGTTTGAA GCATGGCGAA CGGCGCAACT GCGAAGCGTC
GCGCCGGCGG ATCCGGAGCC GTCCGCGTCC GCGGAAGGCC GTGCGACTTT TCAGACCCGT
TGCGGAGCCT GCCATACAGT GCGCGGCACG AGCGCCGGAG GCCGCGTTGG GCCCGATCTC
ACGCATGTGA TGAGCCGGGG AACCATCGCC GCAGGAACTC TGCCCAACAC GCTGGGTTCG
CTCGCCGGCT GGGTTGCGGA TCCGCAGCAT TTGAAGCCAG GCGCAAAAAT GCCCGTCCTG
GAGATGTCGG GGCCGGAGAT CCATAGTGTC ACAGCTTATC TTGCCACGCT GAACTAA
 
Protein sequence
MSDFPLNYLT GYGARALAIL PLTKGMIAIS SIVTLVVALL LLGAIFRSRA AFDPRGLVQD 
TGPLRWVYLG AALTVAALAG VLVWTMTTMA AAVRTGPEAA LSLEVTGRQW WWEVRYLDRA
HPSNIFTTAN EIHIPIGKFV RVDLRGGDVS HSFWVPALGG KTDMIPGQVN TTWLQADKVG
SYRGQCSEYC GKQHAHMAFT VIAESEAQFE AWRTAQLRSV APADPEPSAS AEGRATFQTR
CGACHTVRGT SAGGRVGPDL THVMSRGTIA AGTLPNTLGS LAGWVADPQH LKPGAKMPVL
EMSGPEIHSV TAYLATLN