Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3303 |
Symbol | |
ID | 7090799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 3624426 |
End bp | 3625814 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643466611 |
Product | soluble pyridine nucleotide transhydrogenase |
Protein accession | YP_002363572 |
Protein GI | 217979425 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00106265 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCATGACT ACGATATGAT CGTCATCGGG AGCGGTCCCT CTGGGCGACG GGCCGCGATT CAGTCGGCGA AGCTCGGCAA ATCCGTGCTT GTCGTGGAAA AAGGGCGGCG CGTCGGCGGC GTCTCGGTGC ACACGGGGAC CATTCCGTCG AAAACCCTAC GCGAGACCGT GCTCAATCTC GCCGGCTGGC GGGAGCGCGG ATTTTACGGA CGATCCTATC GCGTCAAGGA GCAGATCGGC GCCGATGATT TGATGGCGCG CATGAGCAAG ACGCTCGACC ATGAGGTCGA GGTGCTCGAA CATCAGTTCA GCCGCAACGC CGTCCGGACC AAGCGCGGCC ACGCCCGCTT TGTCGGCCCG CATGAGGTCG AGATCAAAGG CGAGAGCGGC GAAACGCAAA ATTATTCCGC GGCCCATTTC CTGATCGCGT GCGGCACGCG GCCGTTCAGG CCGGATTATG TGCCCTTCAA TGAAATTAAC GTCTTCGATA GCGACGAAAT CGTCGATCTG AAGAAAGTGC CGCGCAGCCT CACCGTCATC GGCGCAGGGG TGATCGGGGT CGAATATGCG ACGATCTTCA GCGCGCTCGA TGTCGCCGTG ACCTTGATCG AGCCGCGCCC GACTTTCCTC GATTTTCTCG ACAAGGAGGT GATCGAGGAA TTCGTGCATG ATCTGCGCGA CCGCAATGTC GCGCTGAGGC TTGGCTCGCC GGTGACGTCG ATCGCCGTCA ACGGCTCGGT CACGACGACG CTGGGCAATG GCCGCGTCGT CAAATCGGAG ACGTTGCTGT TCGCCGCCGG CCGCGTCGGC GCCACCGACG TGCTCAATCT CGAAGCGGCG GGCATCGAGA CGGATCATCG CGGCCGCATC ACCGTGACGC CCGAGACGCT GCAGACTTCC GTCCCCCACA TCTACGCCGC CGGCGATGTG ATCGGCTTTC CGAGCCTCGC CTCGACCTCG ATGGAGCAGG GGCGCGTCGC CGCATGCCAT GCCTTTGGGC TGCAGCCGTC GCCGCCGCCC GAATTCTTTC CCTATGGCAT CTATTCAGTG CCGGAGATTT CGACCGTCGG CATGACCGAG GAAGAAGTGC GCAAGCGCGA AATTCCTTAT GAATGCGGGA TCGCGCGCTT CCGCGAGACC TCGCGCGGCC ATATCATGGG GCTGAACAGC GGCATGATGA AGCTGATCTT TTCGACCAAG ACGCGGCGTC TGCTCGGCGC CCATATCGTT GGAGAGGGCG CGACCGAATT GATCCATATC GGCCAGGCGG TTTTGAACCT CAAAGGCACG ATCGACTACT TCATCGAAAA CACCTTCAAC TATCCGACGC TGGCGGAAGC CTACAAGATC GCCGGCCTCG ACGCCTGGAA TCGCATGGTC CGGCAATAA
|
Protein sequence | MHDYDMIVIG SGPSGRRAAI QSAKLGKSVL VVEKGRRVGG VSVHTGTIPS KTLRETVLNL AGWRERGFYG RSYRVKEQIG ADDLMARMSK TLDHEVEVLE HQFSRNAVRT KRGHARFVGP HEVEIKGESG ETQNYSAAHF LIACGTRPFR PDYVPFNEIN VFDSDEIVDL KKVPRSLTVI GAGVIGVEYA TIFSALDVAV TLIEPRPTFL DFLDKEVIEE FVHDLRDRNV ALRLGSPVTS IAVNGSVTTT LGNGRVVKSE TLLFAAGRVG ATDVLNLEAA GIETDHRGRI TVTPETLQTS VPHIYAAGDV IGFPSLASTS MEQGRVAACH AFGLQPSPPP EFFPYGIYSV PEISTVGMTE EEVRKREIPY ECGIARFRET SRGHIMGLNS GMMKLIFSTK TRRLLGAHIV GEGATELIHI GQAVLNLKGT IDYFIENTFN YPTLAEAYKI AGLDAWNRMV RQ
|
| |