| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3302 |
|---|
| Symbol | |
|---|
| ID | 7090798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 3623368 |
|---|
| End bp | 3624120 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643466610 |
|---|
| Product | Extensin family protein |
|---|
| Protein accession | YP_002363571 |
|---|
| Protein GI | 217979424 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.000699012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCG TCGTCGCGGC GATCAACGCA AATTGCGGCC GGGCGGCCGC GATGGACGAT
GGTGGCGGAC CGCCGCTGCC GCCGAGGCGC CCGCCGGCGG CCTCAGCTTT CCCCTCGGCG
CCCGCCGCCC CGAGCGCCCC TCCGGCCGCT CCGGCGCCGC CTCCTCCGCC CGCAGCGGCG
AATCAGCCGC CAGCGGCGGA CGATTGCCGG GTGGGCCTTG CCTCCCGCGG CGTCACCCTA
AAGCCTGTGG AGCAAGCATC ACCGGCCGAT CCTCGCTGCG TGATCGCGAC GCCAGTCCAG
CTCATCTCCT TGACGCTGCG CAACGGCCAG CGCGTCGATC TGCCCGATCG CCCGACGCTC
GACTGCCCAA CTGCTGCAAC TTTCGCGGAT TTTGTCGACG AGTTGCTGGC GCCTCTCGCC
AAGGGGTCTT TCGACGCGAC CATCATAGCC ATCGGAACCG GCCCCGGCTT CGATTGCAGA
TCCCGCAACC ACATCGCCGA CAGCAAGCTG AGCGCTCATG CAAAGGGGCT AGCGATCGAC
ATCGCGGCGC TGCATTTCGC GGGCGGACGC CTTTACGAAG TCGGCCGATT GGCCGATGCG
CCGGAGCGCG CCTTCGATCA TGCCGCCCGC GCCGCCGCCT GCGGTTATTT CCACACGGCG
CTCGGGCCCG GCGCCGACGC CTTTCACAGC TCGCATTGGC ATTTCGACCT CGAAACCCGG
GGCTCCGACG GAAAAGCGAA ATTCTGTCAG TAG
|
|---|
| Protein sequence | MLAVVAAINA NCGRAAAMDD GGGPPLPPRR PPAASAFPSA PAAPSAPPAA PAPPPPPAAA
NQPPAADDCR VGLASRGVTL KPVEQASPAD PRCVIATPVQ LISLTLRNGQ RVDLPDRPTL
DCPTAATFAD FVDELLAPLA KGSFDATIIA IGTGPGFDCR SRNHIADSKL SAHAKGLAID
IAALHFAGGR LYEVGRLADA PERAFDHAAR AAACGYFHTA LGPGADAFHS SHWHFDLETR
GSDGKAKFCQ
|
|---|
| |