Gene Msil_3234 details

Gene Information

• Locus tag: Msil_3234
• ID: 7090649
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 3546858
• End bp: 3548708
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643466542
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_002363503
• Protein GI: 217979356
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 25
• Fosmid unclonability p-value: 0.00391519
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCCTCCCT ATCGCTCTCG CACCACGACG CATGGACGCA ATATGGCCGG CGCGCGCGGA 
CTTTGGCGCG CCACCGGCAT GAAAGACGGC GATTTCGGCA AGCCGATCAT CGCCGTCGCC 
AATTCCTTCA CGCAATTCGT GCCGGGCCAC GTCCATCTGA AGGACCTTGG CCAGCTGGTC 
GCGCGCGAGA TCGAGGCGGC GGGCGGAGTC GCTAAGGAAT TCAACACCAT TGCGGTCGAC 
GACGGCATCG CCATGGGTCA TGACGGCATG CTCTATAGCC TGCCCTCGCG CGAGATCATC 
GCCGACTCGG TCGAATATAT GGTCAACGCC CATTGCGCCG ACGCGATCGT CTGCATCTCG 
AATTGTGACA AGATCACGCC CGGCATGCTG ATGGCCTCGC TCCGTCTGAA CATCCCGGTC 
GTGTTCGTTT CCGGCGGCCC GATGGAGGCC GGCAAAGTGT TGCTCGGCGG CAAGACGAAG 
GCGCTCGATC TCGTCGACGC CATGGTCGCC GCCGCCGACG ACAAAGTGTC TGAAGCCGAT 
GTCGCGGCGA TCGAGCGCTC GGCCTGCCCG ACCTGCGGCT CGTGCTCGGG CATGTTCACC 
GCCAATTCGA TGAATTGCCT CACCGAGGCG CTCGGTCTTG CGCTGCCGGG AAATGGCTCG 
ATGCTGGCGA CGCATGGCGA TCGCAAGCGC CTCTTCGTCG AGGCCGGTCA TCTCATCGTC 
GACCTTGCCA GGCGCTATTA CGAGCAGGAC GATTCGTCGG TGCTGCCGCG CTCGATCGCG 
AGCTTTGCCG CTTTCGAGAA TGCGATGACG CTCGACATCT CGATGGGCGG CTCGACCAAT 
ACCGTCCTGC ATCTTCTCGC CGCCGCGCAT GAAGGCGAGA TCGACTTTAC CATGGCCGAC 
ATCGACCGAC TGTCGCGGCG CGTTCCCGTC CTTTGCAAGG TCGCGCCCGC GGTCGCCGAC 
GTGCATGTCG AGGATGTGCA TCGCGCCGGC GGCGTCATGG CGATCCTCGG CGAACTCGAA 
CGCGCCGGGC TGATCCATGG CGATCTGCCT GTGGTGCACG CGCCGAGCCT TAAGGAGGCG 
CTGGAACGCT GGGATCTCCG GCGCACGTCC AGCGAATCCG TCACTGAATT TTTCCGCGCC 
GCGCCGGGCG GCGTGCCGAC CCAGGTCGCA TTCAGCCAGA ACGCGCGCTG GAAAGAGACC 
GATGTCGACC GCGCAGGCGG CGTCATCCGC GACGTCGAAC ACGCCTTTTC CAAGGATGGC 
GGCCTCGCCG TGCTCTATGG CAATCTTGCC GAGGATGGCG CAATCGTGAA GACGGCCGGC 
GTGGACGCGT CCATCCTCGT CTTTTCCGGC CCCGCGCGCG TGTTCGAGAG TCAGGACGCC 
GCCGTCGAGG CGATTCTCGC CAATCAGATC AAGCCGGGCG ACGTCCTGGT GATCCGTTAT 
GAAGGGCCGC GCGGCGGACC CGGCATGCAG GAAATGCTCT ATCCGACCAG CTATCTGAAA 
TCGAAAGGCC TTGGCAAAGC CTGCGCCCTG ATCACCGACG GGCGGTTTTC CGGCGGCACT 
TCAGGTCTCT CGATCGGCCA TGTGTCGCCG GAAGCGGCGG AAGGCGGTTT GATCGGCCTC 
GTCGAGGAGG GCGATTCGAT CCAGATCGAC ATCCCGAACC GGCGCCTGCA TCTCGACATT 
TCCGATGAGG CGCTCGCCCA TCGCCGCACC GCCATGGCGG AAAAGGGCAA GGGCGCATGG 
AAGCCGGCGC ATCGGACGCG AAAAGTCTCG ACCGCGCTCA GGGCCTACGC GGCGATGGCG 
ACCAGCGCCG CGCGGGGCGC CGTGCGCGAC GTCGATCAGC TGTTTCACTA A 

 

Protein sequence

MPPYRSRTTT HGRNMAGARG LWRATGMKDG DFGKPIIAVA NSFTQFVPGH VHLKDLGQLV 
AREIEAAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSREII ADSVEYMVNA HCADAIVCIS 
NCDKITPGML MASLRLNIPV VFVSGGPMEA GKVLLGGKTK ALDLVDAMVA AADDKVSEAD 
VAAIERSACP TCGSCSGMFT ANSMNCLTEA LGLALPGNGS MLATHGDRKR LFVEAGHLIV 
DLARRYYEQD DSSVLPRSIA SFAAFENAMT LDISMGGSTN TVLHLLAAAH EGEIDFTMAD 
IDRLSRRVPV LCKVAPAVAD VHVEDVHRAG GVMAILGELE RAGLIHGDLP VVHAPSLKEA 
LERWDLRRTS SESVTEFFRA APGGVPTQVA FSQNARWKET DVDRAGGVIR DVEHAFSKDG 
GLAVLYGNLA EDGAIVKTAG VDASILVFSG PARVFESQDA AVEAILANQI KPGDVLVIRY 
EGPRGGPGMQ EMLYPTSYLK SKGLGKACAL ITDGRFSGGT SGLSIGHVSP EAAEGGLIGL 
VEEGDSIQID IPNRRLHLDI SDEALAHRRT AMAEKGKGAW KPAHRTRKVS TALRAYAAMA 
TSAARGAVRD VDQLFH