| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3222 |
|---|
| Symbol | |
|---|
| ID | 7090637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 3534734 |
|---|
| End bp | 3535930 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643466530 |
|---|
| Product | DNA replication and repair protein RecF |
|---|
| Protein accession | YP_002363491 |
|---|
| Protein GI | 217979344 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.000505165 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACTG AAGCCCTCGC AACCGAATCG TCGCCCGCGC CGCCGGCCAA ACAGGCGCGG
CGGGGCGTCC GGCGTCTGAC GCTGGCCGAT TTCCGCTCCT ATGCCTCGCT CGACATGGAA
ATCCTGGCGC AGACGGTCGT GCTCACCGGC GACAATGGCG CCGGCAAGAC GAATGTGCTC
GAGGCCCTGT CGCTGCTGAC CCCCGGCCGG GGTCTGCGGC GCGCCGAGCT TTCCGATTGC
GCGCGGAATT TTGGCGGCGG AGGCTTCGCC GTCTCGATCG AAATCGACGC CGAGGGCGGA
CGGCTGCAGC TTGGGACCGG CGTCGAGCCG AACGGCGGAG CGGCGCTGGC GCGCAAATTT
CGCATCGATC GCGAGCCGGC TCCTTCGATC CGGGCCTTTT GCGACCATAT TCGCGTCGTC
TGGCTGACGC CCGCCATGGA TGGGCTTTTT GTCGGCTCTC CCGGCGACCG CCGGCGCTTC
CTCGACAGGC TGGTGCTGTC GCTCGACGCG GATCATGGCG CGCGGGTCAA TGCGCTGGAG
CGCGCGCTGC GCAGCCGCAA CCGGCTGCTT GAAGAGCGCG GCGCCGGCAA TGAGCGGCTC
TGGCTCGACG CGGTGGAGCG CGAGGTCGCC GAGCTTGCGA TCGCCGTGGC TGCCGCGCGC
TTCGAGACGG TCAGCAAGCT CGCAGCCCTG ATCGCCCAGG CCGGCCCGGA GACGGAGGGC
GGCTTTCCGC TCGCGGAGCT GAGCCTCGAT GGCGATATCG ATCGTCTGAT CGAGACGCGG
CCGGCGCTTG AGGCCGAGGA CGAATATCGC AAAATCCTGC GCGACAACCG CGGCCGCGAC
GCCGCCGCGG GCCGCACGCT GATCGGCCCG CAATCGAGCG ATCTTGCCGT TCGGCACGCG
CGCAAACAGG CTGCGGCGTC GCACAGTTCG ACCGGCGAGC AGAAAGCTCT GCTGGTCGGG
CTGATTCTGG CGCAGGCGCG CCTCATCAAG GCGATGAGCG GGCTGGCGCC GCTGGTGCTC
CTCGACGAGA TCGCCGCCCA TTTCGATCCG AAGCGCCGCG CGGCGCTCTA TGAGCTGCTC
GGCGCGCTTG GCGCTCAGGT CTGGCTGACC GGGGCGGACC CCAGCGCTTT CGCCGAGCTC
GAAGGCAAGG CGCAAATGCT GCAGGTCACG CCCGGCGCGA TCCGTGAGCT GCATTGA
|
|---|
| Protein sequence | MQTEALATES SPAPPAKQAR RGVRRLTLAD FRSYASLDME ILAQTVVLTG DNGAGKTNVL
EALSLLTPGR GLRRAELSDC ARNFGGGGFA VSIEIDAEGG RLQLGTGVEP NGGAALARKF
RIDREPAPSI RAFCDHIRVV WLTPAMDGLF VGSPGDRRRF LDRLVLSLDA DHGARVNALE
RALRSRNRLL EERGAGNERL WLDAVEREVA ELAIAVAAAR FETVSKLAAL IAQAGPETEG
GFPLAELSLD GDIDRLIETR PALEAEDEYR KILRDNRGRD AAAGRTLIGP QSSDLAVRHA
RKQAAASHSS TGEQKALLVG LILAQARLIK AMSGLAPLVL LDEIAAHFDP KRRAALYELL
GALGAQVWLT GADPSAFAEL EGKAQMLQVT PGAIRELH
|
|---|
| |