| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3146 |
|---|
| Symbol | |
|---|
| ID | 7093806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 3456473 |
|---|
| End bp | 3457711 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643466456 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002363417 |
|---|
| Protein GI | 217979270 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGTTTAG AGGGCGCCTT TGTCGCGGCG CTGCTTTGCG GAGGGCTTTG CTTGTCAATC
GACATAGGAC CTGCTTTTGC GCTTGACCAG CCGGAAAACG CCAGCGCGCC GCCTGCCTCC
AGCGAGATAA AGATCCTGTA CCTGGCGGGG GATTATCCGA AGGCCGAATA TTTGTCTTTA
TTGCAGAGTC AGCCTGGAGA CGATGGCAAA GCGGGCGCGC TTCTGGCGCT AGGCGAGATC
AACATCACCG GAAAATTCCT CGGATTTTCA TTTGCCATGG ACGTCGTCAC GCTTGAGCGA
GGCGCCGACG TCACGGGAAA GGCGCATGGC CTTCTAGACA AATATAGCGT GGTGGTCGCC
GACCTCAACG CGCCGGATCT TCTAGCGCTG GCCAATGCTC CCGCCGCCCA GCATGCGCTT
ATCTTCGACA TACATACCAG CGACGACGCG TTGCGGCAGG GGAAATGCGC ACGGAATGTC
TTTCACATTC TGCCAAGCAC GGCGATGCGA GCCGACGCCC TGGGGCAATA TCTGGCGAAG
AAAGGCTGGC GGCGATGGTT TGTTCTGCAC GGGCCGAGCG CCGAAGACGC CGCCTTTGCC
GCCGACATCC ATCGTGCGGC GTCCCGCTTC GGCGGCAAGG TCGTCGAGGA TCGGGCCTAT
AATTATGACG CCGGGTCGCG CCGCGTGGAC ACCGGCTACC AACAGATCGC GACACAAATG
CCGCTGGCGA CGCAGGGCGC GCCGGCTCAC GATGTGGTGA TTGTCGCTGA CTCGGCCGAC
CTCTTTGGCG ATTATCTCCC TTACAACACA TTTGAGCCGC GGCCGATCGT CGGCACGCAG
GGACTATCTC CGGTCGCCTG GCATCCGGCG TTTCAGGAAT ATTCGGCGTT GCAGATGCAG
CATCGCTTTG AACTCGCGGC GCATCGCAAA ATGACCGAGC GCGACTATGC CGGATGGCTG
GCGGTTCGCG CCATCGGCGA AGCGGTCATT CGCTCCGGAA AAGCAAATCC GGTGGATCTG
GCCGAGTTCC TACGCTCCGA CGCGTTCGGA GTAGCGGGTT TCAAGGGGCA GGCGCTGACA
TTCCGTCGCT GGGATCAGCA GCTGCGACAG CCGGTCCTTC TGGCCAGCGC TCTAATGGTA
GTCACGATAT CGCCACAGGA TGGCTTCCTG CATCCAAAAT TCTTCACTGA CACCCTCGGA
TATGACGAGC CGGAGACGAA ATGTCATTTC GCTCAATAA
|
|---|
| Protein sequence | MRLEGAFVAA LLCGGLCLSI DIGPAFALDQ PENASAPPAS SEIKILYLAG DYPKAEYLSL
LQSQPGDDGK AGALLALGEI NITGKFLGFS FAMDVVTLER GADVTGKAHG LLDKYSVVVA
DLNAPDLLAL ANAPAAQHAL IFDIHTSDDA LRQGKCARNV FHILPSTAMR ADALGQYLAK
KGWRRWFVLH GPSAEDAAFA ADIHRAASRF GGKVVEDRAY NYDAGSRRVD TGYQQIATQM
PLATQGAPAH DVVIVADSAD LFGDYLPYNT FEPRPIVGTQ GLSPVAWHPA FQEYSALQMQ
HRFELAAHRK MTERDYAGWL AVRAIGEAVI RSGKANPVDL AEFLRSDAFG VAGFKGQALT
FRRWDQQLRQ PVLLASALMV VTISPQDGFL HPKFFTDTLG YDEPETKCHF AQ
|
|---|
| |