Gene Msil_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3142 
Symbol 
ID7093802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3452499 
End bp3453221 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content59% 
IMG OID643466452 
ProductOmpA domain protein transmembrane region-containing protein 
Protein accessionYP_002363413 
Protein GI217979266 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAGA CTCCCTTGTC GGCTTTGGCC GGTCTGCTCG CGCTCGCTGG TCCCTCCCTT 
GCCGCTGAGC CGCCGCCATC GCCTCCGCCC TTGACCTGGG CCGGATTTTA TCTCGGCGGT
CAGGTCGGCT ACGGTTGGGG TTCCGATTCC GGCAATGTGA CCGGCGGCTT CCCCCTATCG
CCGACGATAC AGACCGCCTC AACTTCGACG CAGACGCAAG GAGCGATCGG CGGCGCGCAT
ATCGGCAACA ATTGGCAGAT CCAGAATTTC GTGATTGGCC TTGAAGGAGA CGTCAACGGA
ACGACGCTGT CGAAGATGTC GACGCCGCTC TTCAACAATT TGTACTTTCC CTATACGCAA
TCGCCGGTGC AGGGAACGGT TCGCGGTCGC CTCGGCTACG CCTTGGATCG CACGCTGCTC
TACGCGACGG GAGGTCTCGC TTACGGTTGG ATTCACAACG ACTACAATAT CTTTGGAAGC
AGGAGCAGTT TTTCGACGAC CAAGGCGGGC TGGACGATCG GCGGAGGCGT CGAATTCGCC
GTCAATGACA ATTGGTCGGT GAGGGCAGAG TATCGCTACA CAAGGTTCGG CTATTTTAGC
GATGGGCCGA TCGCCTATCC GACGGTATCC CAGAGTCATA GCTCGACGCA GAACCAGCTT
CAGGTCGGCT TCAGCTACAA ATGGCCGCCC CTCGCGCCCG CAGCCGTCGT CGCCAAATAT
TGA
 
Protein sequence
MFKTPLSALA GLLALAGPSL AAEPPPSPPP LTWAGFYLGG QVGYGWGSDS GNVTGGFPLS 
PTIQTASTST QTQGAIGGAH IGNNWQIQNF VIGLEGDVNG TTLSKMSTPL FNNLYFPYTQ
SPVQGTVRGR LGYALDRTLL YATGGLAYGW IHNDYNIFGS RSSFSTTKAG WTIGGGVEFA
VNDNWSVRAE YRYTRFGYFS DGPIAYPTVS QSHSSTQNQL QVGFSYKWPP LAPAAVVAKY