| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3025 |
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| Symbol | |
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| ID | 7093113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3337890 |
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| End bp | 3339215 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643466335 |
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| Product | TRAP transporter solute receptor, TAXI family |
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| Protein accession | YP_002363297 |
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| Protein GI | 217979150 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGTAGCA TCGCCCTTGT CGCGGTCGGC GTCGCTTGCG TGCTCGGCGC CGCCGGTCTT
TCTCTCTATC TTTACGAGCG CCCGACCGTT CTGCGCGTTG CGGTCACCCG CGAAAGCGAC
GATCAACATG TGCTCGCCGT CGCGGCGCAT GAATTCGCGC AGGCGCGCGA TCAGGTGCGG
CTGAAGCTCG TTCTGGTCGA TTCTCTTGCC GAAAGCGCGC GCGCCTTCGA GGATGAGCGC
GTCGATCTCG CGATCGTGCG CAGCGACGTC GCCATGCCGG TCAGCGGACA GACCGTGCTG
ATCATGCGGC GCAACGCCGC CGTGCTCATG GCCCCGGCCG GATCGGAGAT TCGCCAGCTT
GGCGATCTCA AAGGTCGTCG GATCGGCGTG GTGGAAGCGG CGCGCACCGG GCGGTCGGGC
GTGAACGCTC TGCTCGATGC GGCTCTGGCG CAATATGATG TGGCGGCGTC CTCGGTGCGC
CGCGTGCCGC TGACGCCGGC CGAACTGCCC GACGCGATCG AACGGCGCGA TGTCGACGTT
GCGCTCGTGA TCGATACGCC CGGCGCCGAA ACCCTCAACG AGGCCGTGGC CGCCGTGACG
CAGGCGGGTC GCGGGCCGCC TGTCTTCATC TCGATCGACG ACGCCAAGGC GATCGCCCAG
CGCAGCCCGA ATTTTGAATC GATCGAAGTC CTGCGCGGCG TCTTCGGCGG CGCTCAGCCC
AAGCCCGCGG CGAGTTTTGA GACTCTTGGC GTGAGCACAC GGCTGATCGC CCGCCACAGC
CTCGGCAATG ACGTTGTCGC CGCGCTGACG GAGCTCTTGC TGACGGCGCG GCCATTGCTG
GCGGCGCAGG AGCCGATCGC AAATCGTATC GAACCGCCCC CGACCGATAA GGGCGCGGCG
CTTCCCGTGC ATCCGGGGGC GCTGGCCTAT CTTGGCGACG AAGAGCAGAG CTTCTTCGAT
AAATACAGCG ATTTCATCTA TATCGGGGCG ATGCTGGCGA GCTTGTTCGG CACCGCGATC
GCAACGCTCG CGGCGCGCTT CAACCGCAAG CGCAACACCG ATCTCGAGGA GATATTGCAT
CGCCTCTTGC AGATCATTGC CGCGGCGCGA ACCGCCCCAC GGACCGACAT GCTGGACGAT
CTTGAAAAAG AAGCCGACGA TCTGCTTGCC CAGGCGCTTG CCCATGACTG GAATCATGCG
ATGAGCGGCA GCCGCGTCGC GGCGACCGAT CTGGCGCTGA ATCAGGCGCG TCAGGCGATC
ACCGACCGCC GGCTTTATCT GGCTTCGCCG CGCGGGACCT TCGCGCCGCG CCTCGTCGGC
GATTAG
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| Protein sequence | MRSIALVAVG VACVLGAAGL SLYLYERPTV LRVAVTRESD DQHVLAVAAH EFAQARDQVR
LKLVLVDSLA ESARAFEDER VDLAIVRSDV AMPVSGQTVL IMRRNAAVLM APAGSEIRQL
GDLKGRRIGV VEAARTGRSG VNALLDAALA QYDVAASSVR RVPLTPAELP DAIERRDVDV
ALVIDTPGAE TLNEAVAAVT QAGRGPPVFI SIDDAKAIAQ RSPNFESIEV LRGVFGGAQP
KPAASFETLG VSTRLIARHS LGNDVVAALT ELLLTARPLL AAQEPIANRI EPPPTDKGAA
LPVHPGALAY LGDEEQSFFD KYSDFIYIGA MLASLFGTAI ATLAARFNRK RNTDLEEILH
RLLQIIAAAR TAPRTDMLDD LEKEADDLLA QALAHDWNHA MSGSRVAATD LALNQARQAI
TDRRLYLASP RGTFAPRLVG D
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