| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2880 |
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| Symbol | |
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| ID | 7092796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 3168302 |
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| End bp | 3168976 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643466190 |
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| Product | type VI secretion-associated protein, BMA_A0400 family |
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| Protein accession | YP_002363159 |
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| Protein GI | 217979012 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3913] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.038382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTGCG GCCTTTATGG CAAACTGCCG TCGAAGCGCG ATTTCATCGC CGTTTCGGCC
CCGCGCGCTT TCCTGCGCCT GTGGGAGCCC TGGATCGAAC AGGGCCTCGC CTTCGGCCGC
GCGCGCGGCT CCGAGGAAGA ATGGGCCGAG GCCTTCAATT CCGCGCCGAT CTGGCGGTTC
TGGCTCGGCC CGGCGCTTTG CGGCGAGGCC TTCATCGGCG CTTTGATGCC GTCTGTCGAC
GCGATCGGCC GCATGTATCC GCTGACGCTG ATCGGCGTCG CCTCCGACAA GGAGGAGAAG
GTTGATCCCC CCGACGTCGA TCCTCGCGAG CTCTGGTTTG CGAGCGTCGA GCAATTGTTG
CTCGACGCGC TGGATCCCGA GGCGCCTTTT CCAACGCTTT TGGCGCGTCT CAAAACCCTT
TGCGCCTCTC CCGCGCTCGA TGAAAACGCA GCCGCGCTCG CCGGCGCCTT CGCGCAGATG
CGCGCGGAAT TGCAGGATTG CGCGCCGGGC GAAGCGAGTT TCTGGTGGAC GATCGGCGGC
CCGGCCTTCC CGCCGCTCGT CCTGGCGCAG ATCGGGATGC CCCCCGAGTC CGCCTTCGCC
GATATGCTGA GCCGCCGCCC GCCAGACGAG GCCGCACAGG ACGCCCCGCT CCAAACGGTT
ACGCAACCCG GATAA
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| Protein sequence | MRCGLYGKLP SKRDFIAVSA PRAFLRLWEP WIEQGLAFGR ARGSEEEWAE AFNSAPIWRF
WLGPALCGEA FIGALMPSVD AIGRMYPLTL IGVASDKEEK VDPPDVDPRE LWFASVEQLL
LDALDPEAPF PTLLARLKTL CASPALDENA AALAGAFAQM RAELQDCAPG EASFWWTIGG
PAFPPLVLAQ IGMPPESAFA DMLSRRPPDE AAQDAPLQTV TQPG
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