Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2760 |
Symbol | |
ID | 7092213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 3038287 |
End bp | 3039588 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643466073 |
Product | TRAP transporter solute receptor, TAXI family |
Protein accession | YP_002363043 |
Protein GI | 217978896 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA GCGCGGGCCT GCGACGGACA ATTGGCGTGC TTTGCCTCGC TTCGATCGTT GGCCTCGCCG CGTGGGTCTG GCATTTTTAC TACCGCCCGG TCATTCTTAC CGTTGCGGTC GGGCCGCCGA GCTTCGACGA CGCCGATTTG ATCGCCTCCA TGGCCCGGGC TCTGGCGGCC GACGGCTCGC ATATCCGCCT TTCGATCGAA CAGACTCCCG GGCCGATTGA ATCGCTCGAG CGGCTGAAAA AGGGGCAAGC GCAACTCGCC GTCATCCGAA ATTTGGGAGA CGTGCCGGAT CGAGTCCGAT CGATCGCCAT CCTGCATAGC GATCCCATCG CAATCGTCGC GCCGAAATCG GCAAAGATAG AGAACTTTCG CGAGTTGGCC GACAAGACAT TGGGGCTGGT CGGGCCGCCT GGCTCCTATG CGAGGCTGAT GACGTGGATG CGGCAGCGCT ACCATGGCGA ATTCGCATCG GTTGACATAC CGCCCGTGGT CGCCGAGATC GCGGCGGCCA TCAACGCAAA GAAGATCGAC GCGCTGCTGT TCATTATTCC GACAACAAAG AGCGGCGCGC TATCGGAGCG GTGGGCCTCG GTCCGAAGAC TCACTCGCAA GTCGATGAGC TTCGTGTCTA TCGATGACGC CGAAGCGATC GAATCCGCCG CGCCCGAATT CGAGCAAGGC GAAATTTCAT CCGGCGCGTT CGGAGGGTCG CCGCCGGTCC CGCCCGAAAA TGTGACGACC CTGCTCGTGA CGACCTATCT CGTCACCGAC CAAAGCGTGC GCTCAGACAT CGCGACAGAA TTGACCCGTT TTATTTTCGA GAATCGGCAG CGGTTTACCC CCGACGCGCC GGTCGCCGCG CTGATCAAGG CGGCGAGCAC CGACAAGGAC GCAATCATCC CCGTACATAA AGGCGCGAAG GAGTTTTTCG ACGGCGAGGA ACAGACATTG ATGGAACGTT ATGGCGACTG GCTCTACACG GGACCCATCA TCCTCGGCGC GCTTTATTCG GCGCTGCTGG CGATCTGGCA CATGCTCAGG CCATCGCCGC CGGAGGCTCC ACTACTGGCG AGCGTTCCCG AAATCTCCTA CAGCATCAAA AATGCAACAT CATTGGGCGA GCTTGACGCC ATAAGCGCGC GGGTCGACGC CGCTATCGAA CGCATCTCGG CGGAGGCGCT CGACGGCAAG CTGGAGGACA GCAAAGTCGG AGCCAATTCT CTCGTCATCG CGTATATCAA CAGGCTCGTG CGAGAGAAGC GCGCCGAGCT TCAGAAAAGC GCCGGCGCTT GA
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Protein sequence | MKFSAGLRRT IGVLCLASIV GLAAWVWHFY YRPVILTVAV GPPSFDDADL IASMARALAA DGSHIRLSIE QTPGPIESLE RLKKGQAQLA VIRNLGDVPD RVRSIAILHS DPIAIVAPKS AKIENFRELA DKTLGLVGPP GSYARLMTWM RQRYHGEFAS VDIPPVVAEI AAAINAKKID ALLFIIPTTK SGALSERWAS VRRLTRKSMS FVSIDDAEAI ESAAPEFEQG EISSGAFGGS PPVPPENVTT LLVTTYLVTD QSVRSDIATE LTRFIFENRQ RFTPDAPVAA LIKAASTDKD AIIPVHKGAK EFFDGEEQTL MERYGDWLYT GPIILGALYS ALLAIWHMLR PSPPEAPLLA SVPEISYSIK NATSLGELDA ISARVDAAIE RISAEALDGK LEDSKVGANS LVIAYINRLV REKRAELQKS AGA
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