| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2562 |
|---|
| Symbol | |
|---|
| ID | 7093216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2797541 |
|---|
| End bp | 2798407 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643465878 |
|---|
| Product | Pirin domain protein |
|---|
| Protein accession | YP_002362848 |
|---|
| Protein GI | 217978701 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.191754 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAAA TAGCCGGAGT GTTTGGCGCT CCGAAGCCGC ATTGGGTGGG CGACGGCTTT
CCGGTTCGCA CGCTGTTCTC GCACGGAAGC TTTGGCGAGA CGGTGAGCCC GTTCCTGCTG
CTCGATTATG CCGGCCCCGC GCGTTTCCCG CCGGCGTCGA CGCCGCGCGG CGTCGGCGTG
CATCCGCATA AGGGGTTCGA GACCGTCACG ATCGTCTATA GCGGCGAAGT CGAGCATCGC
GATTCGACCG GCGAGGGCGG CGTGATCGGC CCCGGCGACG CGCAATGGAT GACCGCCGCC
AGCGGTATTC TGCATCAGGA GCATCATTCG CAGGGTTTTA CGCGCGATGG CGGCGAGCTT
GAGATGATCC AGCTCTGGGT CAATCTCCCG GCCGCCGACA AAAACGCCCC GCCCGGCTAT
CAGACGCTGC TCGATCGGAA CATTCCCTTT GTCGATCTGC CTGACGAGGC CGGCCGCGTG
CGGGTCATCG CCGGCGATTT CCTGGGGACC AAAGGTCCTG CGCGCACTTT CACCCCGGTC
AACCTGTGGG ATGTTCGCTT GCGCCGCGGC GGCCGCGCGA GTTTTTCGGC GCCCGAGGGC
CATACGCTCG CAATCGTCGT GCTCAAGGGC GCCGTGCTGA TCAATGGCGA GACGATCGCT
CGGGAGGCGC AGCTCGCCCT GTTCGAGCGC AAGGGCGGTT CGATCGCCAT CGAGGCCAAT
AGCGACGCGG CGCTGCTGAT CCTTTCCGGC GAGCCGATCG ACGAGCCGGT TTTCATGCAG
GGACCGTTCG TGATGAACAG CCGCGAGGAA ATCCGCCAGG CGATCGATGA TTTCCAGCAC
GGAAGGTTCG GCCGGATCCC GGCTTGA
|
|---|
| Protein sequence | MRKIAGVFGA PKPHWVGDGF PVRTLFSHGS FGETVSPFLL LDYAGPARFP PASTPRGVGV
HPHKGFETVT IVYSGEVEHR DSTGEGGVIG PGDAQWMTAA SGILHQEHHS QGFTRDGGEL
EMIQLWVNLP AADKNAPPGY QTLLDRNIPF VDLPDEAGRV RVIAGDFLGT KGPARTFTPV
NLWDVRLRRG GRASFSAPEG HTLAIVVLKG AVLINGETIA REAQLALFER KGGSIAIEAN
SDAALLILSG EPIDEPVFMQ GPFVMNSREE IRQAIDDFQH GRFGRIPA
|
|---|
| |