Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2435 |
Symbol | |
ID | 7093987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 2654853 |
End bp | 2656355 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643465756 |
Product | RND efflux system, outer membrane lipoprotein, NodT family |
Protein accession | YP_002362726 |
Protein GI | 217978579 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0164231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGA GAAAAGCCAC AGGCCTTGCT GCGGCTATGC TGGCGTGCCT CACGATAGGC GGCTGTTATT CGGTCGGACC GGATTTCACG GCGCCTGATC CGCTGCTGCC GCGTACGTCT TTCCTTGGCA AACCGGAGCC GCGCGCGGAG CCGGAGCCGC CACGTTTGAG CGAACAGGGC TCGGGCGCCG ACTGGTGGCG GACCTTTCAC GACAAGACGC TGACGTCCCT CGCCGAGCGG GTCGCCGGCG CCAATCTCGA CATCGCCTCC GCGACCGTGC GGCTCGGCGA AAGCCGGGCG CAGCGCGGAG TCGTCGCCTC CGCCGCCTTC CCCTCGATCA ACGGCCAGGC GTCCTACCAG CGCGAACTCT ACAGCAAGAA CGGCATATTG AGTCTCGCCG GTCCCAACAT CAACGCGCCG CCGATCAGCG TCTGGCAAAC CGGCTTCGAC GCGTCATGGG AGCTCGACAT CTGGGGCCGC GTGAGACGGC AGGTCGAATC CGCGGACGCT TCGCTGGAGG CCTCGGAATA TCAGCGCCGC GATATTCTCG TGTCGACGCT GGCCGAGCTC GCGCGCGATT ATGTAACGCT GCGGGGCGCG CAGGCGCAGA TCGCGATCTT GACCGAGAAT CTCAAAAGCG CGAGCGACAT TCTCGAGCTG ACGCGCACGA GAACCGCCAA AGGGCTGACA AGCGACCTCG ACGTGCAGAA TGCGGCGGCG CTGGTCGAAA GCATCAAGGC GCAGCTGCCG GCGCTGCAAA ACGACGTCGA CGTCAACGCC AATGCGATCA GCTTCATCCT GGACGAGCAG CCAGGCTCGC TCAAGGGTGA GTTGATGCAG GCGAAAAGCC GCATTCCGGC GCCGCCGCGC CCGCCCCTTG GCGTTCCGTC CGAACTCGCG CGCCGGCGGC CGGACATCCG CGCCGCGGAG GCGCAGCTGC ATGCGACGAC CGCCGATATC GGCGTCGCCG TGGCCGATTT CTATCCGAGC GTGAAGCTAA ACGGCAATCT CGTGCTGAAC GCGCTCGACG CCAAAAATTT GTGGAAAGGA AGCTCGCTGC AATATCAGTT CGGGCCGAGC GTCTCGCTGC CGATTTTTGA AGCGGGGCGA TTGAAATCGA CCCTCGACCT CCGGTCGCAA CAGCAGCAGG AAGCGGCGAT CGCCTACCAC AAGACCGTGC TTTCCGCCTG GCACGAGATT GTCAATGCGC TGAACGCCTA CAGCTCCGAG CAGCGCCGCC GCGACAGCCT CAAGGCGCAG GTCGATCACG CCAGTCAGGC TCTCGCGATC TCGCGCACGC GCTACAACAA TGGCGTCGCC GATTTTCTGA CCGTGCTCGA TGCGCAGCGC ACGGTGCTCC AGGCGATGCA ACAGCAGGCG CAGAGCACGA CGAATGTGTC GATCAGCCTG ATCCAGCTCT ACAAGGCGCT CGGCGGCGGC TGGCAGACGA CATTTCCGAC GGAGCCGCCG CCGCCCATGG AGGCCGCCTT CGCGCCGCTG TAG
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Protein sequence | MTTRKATGLA AAMLACLTIG GCYSVGPDFT APDPLLPRTS FLGKPEPRAE PEPPRLSEQG SGADWWRTFH DKTLTSLAER VAGANLDIAS ATVRLGESRA QRGVVASAAF PSINGQASYQ RELYSKNGIL SLAGPNINAP PISVWQTGFD ASWELDIWGR VRRQVESADA SLEASEYQRR DILVSTLAEL ARDYVTLRGA QAQIAILTEN LKSASDILEL TRTRTAKGLT SDLDVQNAAA LVESIKAQLP ALQNDVDVNA NAISFILDEQ PGSLKGELMQ AKSRIPAPPR PPLGVPSELA RRRPDIRAAE AQLHATTADI GVAVADFYPS VKLNGNLVLN ALDAKNLWKG SSLQYQFGPS VSLPIFEAGR LKSTLDLRSQ QQQEAAIAYH KTVLSAWHEI VNALNAYSSE QRRRDSLKAQ VDHASQALAI SRTRYNNGVA DFLTVLDAQR TVLQAMQQQA QSTTNVSISL IQLYKALGGG WQTTFPTEPP PPMEAAFAPL
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