Gene Msil_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2435 
Symbol 
ID7093987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2654853 
End bp2656355 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content65% 
IMG OID643465756 
ProductRND efflux system, outer membrane lipoprotein, NodT family 
Protein accessionYP_002362726 
Protein GI217978579 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0164231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA GAAAAGCCAC AGGCCTTGCT GCGGCTATGC TGGCGTGCCT CACGATAGGC 
GGCTGTTATT CGGTCGGACC GGATTTCACG GCGCCTGATC CGCTGCTGCC GCGTACGTCT
TTCCTTGGCA AACCGGAGCC GCGCGCGGAG CCGGAGCCGC CACGTTTGAG CGAACAGGGC
TCGGGCGCCG ACTGGTGGCG GACCTTTCAC GACAAGACGC TGACGTCCCT CGCCGAGCGG
GTCGCCGGCG CCAATCTCGA CATCGCCTCC GCGACCGTGC GGCTCGGCGA AAGCCGGGCG
CAGCGCGGAG TCGTCGCCTC CGCCGCCTTC CCCTCGATCA ACGGCCAGGC GTCCTACCAG
CGCGAACTCT ACAGCAAGAA CGGCATATTG AGTCTCGCCG GTCCCAACAT CAACGCGCCG
CCGATCAGCG TCTGGCAAAC CGGCTTCGAC GCGTCATGGG AGCTCGACAT CTGGGGCCGC
GTGAGACGGC AGGTCGAATC CGCGGACGCT TCGCTGGAGG CCTCGGAATA TCAGCGCCGC
GATATTCTCG TGTCGACGCT GGCCGAGCTC GCGCGCGATT ATGTAACGCT GCGGGGCGCG
CAGGCGCAGA TCGCGATCTT GACCGAGAAT CTCAAAAGCG CGAGCGACAT TCTCGAGCTG
ACGCGCACGA GAACCGCCAA AGGGCTGACA AGCGACCTCG ACGTGCAGAA TGCGGCGGCG
CTGGTCGAAA GCATCAAGGC GCAGCTGCCG GCGCTGCAAA ACGACGTCGA CGTCAACGCC
AATGCGATCA GCTTCATCCT GGACGAGCAG CCAGGCTCGC TCAAGGGTGA GTTGATGCAG
GCGAAAAGCC GCATTCCGGC GCCGCCGCGC CCGCCCCTTG GCGTTCCGTC CGAACTCGCG
CGCCGGCGGC CGGACATCCG CGCCGCGGAG GCGCAGCTGC ATGCGACGAC CGCCGATATC
GGCGTCGCCG TGGCCGATTT CTATCCGAGC GTGAAGCTAA ACGGCAATCT CGTGCTGAAC
GCGCTCGACG CCAAAAATTT GTGGAAAGGA AGCTCGCTGC AATATCAGTT CGGGCCGAGC
GTCTCGCTGC CGATTTTTGA AGCGGGGCGA TTGAAATCGA CCCTCGACCT CCGGTCGCAA
CAGCAGCAGG AAGCGGCGAT CGCCTACCAC AAGACCGTGC TTTCCGCCTG GCACGAGATT
GTCAATGCGC TGAACGCCTA CAGCTCCGAG CAGCGCCGCC GCGACAGCCT CAAGGCGCAG
GTCGATCACG CCAGTCAGGC TCTCGCGATC TCGCGCACGC GCTACAACAA TGGCGTCGCC
GATTTTCTGA CCGTGCTCGA TGCGCAGCGC ACGGTGCTCC AGGCGATGCA ACAGCAGGCG
CAGAGCACGA CGAATGTGTC GATCAGCCTG ATCCAGCTCT ACAAGGCGCT CGGCGGCGGC
TGGCAGACGA CATTTCCGAC GGAGCCGCCG CCGCCCATGG AGGCCGCCTT CGCGCCGCTG
TAG
 
Protein sequence
MTTRKATGLA AAMLACLTIG GCYSVGPDFT APDPLLPRTS FLGKPEPRAE PEPPRLSEQG 
SGADWWRTFH DKTLTSLAER VAGANLDIAS ATVRLGESRA QRGVVASAAF PSINGQASYQ
RELYSKNGIL SLAGPNINAP PISVWQTGFD ASWELDIWGR VRRQVESADA SLEASEYQRR
DILVSTLAEL ARDYVTLRGA QAQIAILTEN LKSASDILEL TRTRTAKGLT SDLDVQNAAA
LVESIKAQLP ALQNDVDVNA NAISFILDEQ PGSLKGELMQ AKSRIPAPPR PPLGVPSELA
RRRPDIRAAE AQLHATTADI GVAVADFYPS VKLNGNLVLN ALDAKNLWKG SSLQYQFGPS
VSLPIFEAGR LKSTLDLRSQ QQQEAAIAYH KTVLSAWHEI VNALNAYSSE QRRRDSLKAQ
VDHASQALAI SRTRYNNGVA DFLTVLDAQR TVLQAMQQQA QSTTNVSISL IQLYKALGGG
WQTTFPTEPP PPMEAAFAPL