| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2364 |
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| Symbol | |
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| ID | 7090348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 2573523 |
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| End bp | 2575481 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643465686 |
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| Product | type VI secretion protein, VC_A0110 family |
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| Protein accession | YP_002362656 |
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| Protein GI | 217978509 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0952212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCG AGTTCCTCGA CCATTACGAT CGCGAACTGA AGCTTCTGCA CGAGCAGGCG
CGTGAATTCG CCGAAGATTA TCCGGGCGTC GCCGAGCGCC TCGGCGGGTT GCTCGACGAG
CGCATGGATC CGATGATCGG CGGCCTGCTC GAGGGCGCCG CCTTTCTCGC GGCGCGGGTG
CAATTGAAGC TGAAACACGA GTTTCCGGAA TTCACCAATA ATCTGCTGGA GCAGCTCGTT
CCCGACTATC TTGCGCCGAC GCCTTCCGTT CTGCTTCTGC GCGCCGAGCC CCCTTACGAG
GACGCCGCGT TGCGCGACGG GCAGAACATT GCGCGCGGCT CCTATCTCGA GGCGGTCTAC
CGCGAGCAGG ATCGCCAGGT CGCCTGCCGC TTCCGCCTCG CCTCCAAAAT CACGCTGCTG
CCGTTCGAAA TCACCGCCGC CGAATATTAT GGCTCGCCGG CGCCGCTGCA GGCGCTCGGA
GTCGCCGTCG GCGCCGAGGC GCTGGCCGGC TTGAAGATCT CGCTGACCCA CCGCAGCGCC
GCGCGCGTCG AGGACGAGCC GCGCGACGCC GAGGCCGCCG AACGGCCGGA CCTCTGGTTC
GACGGTTGCC GGATCAACGA ATTGCCGCTC CATTTCCTCG GGCCCGAACC CGACGCGATC
GCGCTCTACG AGCAGATCTT CGCCAGCGCG GCCGGCGTCT ATTTCCGCTA TCTCGACCCT
TTCGGCGACC CTGTCGTCGT CCCGGCCGGA ACGGACATCA TCGAGCAGAT CGGCTTTCGC
GACGACGAGG CGCTGTTTCC CAAGAACGAG CGCATTTTTT CCGGCTTCGA ATGGCTGCGC
GAATATTTCA TGTTCCCGCG CAAGTTTCTT GGAATGCGGC TGACCGGGCT GCGCGCGATC
CTCGCCCGCC TGCCCGCGCG AAACATTGAC ATCATCATCA GCTTCAAGGA GCTCAATCCG
CGCCTGCAGG TCGCCGTCAC GCGCAACATG TTTGCGCTCT ATGCAGCCCC CGCCATCAAC
CTCTTTGAAA AAACCATCGA TCGCGTGCAG GTCAAATCCA ACCAGCACGA ATATCATATC
GTGCCCGATC GCAGCCGCTA TCTCGACTAT GAACCGCACC GGCTGCTTTC GGTCTTCGCG
CATTATCGCG GCGGGGCGGA CGCGGCGCCC GTGCGCCCGC TATATTCCTC CGAGGCGGAA
GGCGGCGCGG GCGCATTGCA TTACGCCGTT CGCCGCATGC CGCGCCGGCG CACGGCGCGG
GAAAACAAAT ATGGCGCCTC CTCCGATTAT GTTGGCACCG ACATGTTTAT CGCCCTCGTC
GACAATTCGC GCGCGGGCGA GGAGCGGCCG ATCGCCGAGC TCAGCGTCAC GGCGCTCTGC
TCCAACCGTC ATCTGACCGA GCAGCTTCCG GTCGGTCAGG GCGGCGCCGA TTTCCGCCTG
ATCGACAACA CCGCGATCGA TCTGCGCTGC ATCGCCGGAC CGACGCGGCC GCGCGAGCCG
ATCATCGCGC AATTGCGCAG CCGCAGCGAA TCGGCCTACG CCGGCAAGGT GACCTGGCGC
CTCATCAATC TGCTCAGCCT CAATCATCTC GGCCTCGTCG AGCGCGGCGC CGGCCGCAAT
GCGCAGGCGC TGCGCGAAAC CGTCTCGATG TTCGCCGATC TTTCCGACAG CGCCACGGAG
CGGCGCATCC GCGGCCTGCG CAGCGTCGAC AGCCGCCCCA TCGTGCGGCG CATCCGCCAG
AGCGGCGGCG TCGGCGTTGC GCGCGGCGTC GAAGTCACCG TAACGATCGA CGAAAAAGCG
TTCGAGGGCA GCGGCGCCTT TTTGCTCGGC GCGATCCTCG ACCGCTTCTA TTGCGAATAT
GCGGGCTTCA ATCATTTCAC GCAGACGGTG ATCCGCAGCG TCGATCGCGG CGAGATCATG
CGCTGGCCGG TGCGCGCCGG CTTACGGAGA CCGCTATGA
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| Protein sequence | MNREFLDHYD RELKLLHEQA REFAEDYPGV AERLGGLLDE RMDPMIGGLL EGAAFLAARV
QLKLKHEFPE FTNNLLEQLV PDYLAPTPSV LLLRAEPPYE DAALRDGQNI ARGSYLEAVY
REQDRQVACR FRLASKITLL PFEITAAEYY GSPAPLQALG VAVGAEALAG LKISLTHRSA
ARVEDEPRDA EAAERPDLWF DGCRINELPL HFLGPEPDAI ALYEQIFASA AGVYFRYLDP
FGDPVVVPAG TDIIEQIGFR DDEALFPKNE RIFSGFEWLR EYFMFPRKFL GMRLTGLRAI
LARLPARNID IIISFKELNP RLQVAVTRNM FALYAAPAIN LFEKTIDRVQ VKSNQHEYHI
VPDRSRYLDY EPHRLLSVFA HYRGGADAAP VRPLYSSEAE GGAGALHYAV RRMPRRRTAR
ENKYGASSDY VGTDMFIALV DNSRAGEERP IAELSVTALC SNRHLTEQLP VGQGGADFRL
IDNTAIDLRC IAGPTRPREP IIAQLRSRSE SAYAGKVTWR LINLLSLNHL GLVERGAGRN
AQALRETVSM FADLSDSATE RRIRGLRSVD SRPIVRRIRQ SGGVGVARGV EVTVTIDEKA
FEGSGAFLLG AILDRFYCEY AGFNHFTQTV IRSVDRGEIM RWPVRAGLRR PL
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