| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2362 |
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| Symbol | |
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| ID | 7090346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 2572355 |
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| End bp | 2572840 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643465684 |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_002362654 |
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| Protein GI | 217978507 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0568076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGGGG ATCTTTTTCT GAAGCTTGAA GGCATCGAGG GCGAAAGCGA GGACTCGAAG
CACAAGAACG AAATGCAGGT CGAAACCGTG TCCTGGGGCG TCTCCAACGC CACCTCTTTC
TCGCAGGGCG GCGGCGGCGG CGTCGGCAAG GCGCATCTGC AGGACATCCA CCTGACCAAG
AAGGTGGACA AGGGCAGCCC CAAGCTGTTC CTCGCCTGCG CCTCCGGCGA GCATATCAAG
ACGGCGACGC TGACCTTCCG CAAATCCGGC AAGGACCAGC AAGAATATCT GAAGATTACG
CTGACCGACG TCATGGTGTC GTCGATCTCG TTTCAGGACC ATGCTGCCGG CGGCGACCTC
GCTCACGAGA GCATCTCGCT CGCCTACGCC AAGATCGAGA CCGAATACAA GCCGCAGAAG
CCCGACGGAA CCCTCGGCGG CGCCGTCACC ACCGGCTGGA ACATCAAGGA AAACAAGAAA
GTCTAG
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| Protein sequence | MSGDLFLKLE GIEGESEDSK HKNEMQVETV SWGVSNATSF SQGGGGGVGK AHLQDIHLTK
KVDKGSPKLF LACASGEHIK TATLTFRKSG KDQQEYLKIT LTDVMVSSIS FQDHAAGGDL
AHESISLAYA KIETEYKPQK PDGTLGGAVT TGWNIKENKK V
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