Gene Msil_2360 details

Gene Information

• Locus tag: Msil_2360
• ID: 7090344
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 2570154
• End bp: 2570705
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643465682
• Product: type VI secretion protein, VC_A0107 family
• Protein accession: YP_002362652
• Protein GI: 217978505
• COG category: [S] Function unknown
• COG ID: [COG3516] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03358] type VI secretion protein, VC_A0107 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 0.109575
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAGGTG ACAGTGGACA GAAATTCATT GGACGCAACC GTCCGCCACG TGTGCAGATT 
GCTTATGAGG ATCCCTATGA CGCGGAGCGA AAGATAGAGC TGCCCTTCGT CATGGGCGTG 
CTCTCCGACC TCTCCGGCCC GAACCCCGGC GTCGAGAAGC CGGACGTCGC CGATCGGGGC 
TTCGTCGATA TCGACATGGA TAATTTCGAC AAGCGCATGG GCGCGATCGA GCCTGGAACA 
TCCTTCACCG TGCCGGACCG GCTTGGCGAC GACCCGGACG CCGCCAAATT GTCGGTCAGC 
CTGCGCTTCA AGAAGATGGA AGACTTCGGC CCGGCGGCGG TCGCCCGGCA GGTGCCGGCG 
CTCGCCAAAC TGCTCGAGGC GCGCGACCAG CTGGCAAATC TGTTGCGCTA TATGGACGGC 
AAGGTCGACG CCGAAACGCG GCTGCGTAAA TTGCTGAGCG ATCCCGAACT GATGGCGGCG 
CTGAAAAGCC GCATCGGCGC GACGAAGGAC GCTGAAGCCG AAACCGCCAA GACCGCCGAC 
GGCGACGCTT GA 

 

Protein sequence

MAGDSGQKFI GRNRPPRVQI AYEDPYDAER KIELPFVMGV LSDLSGPNPG VEKPDVADRG 
FVDIDMDNFD KRMGAIEPGT SFTVPDRLGD DPDAAKLSVS LRFKKMEDFG PAAVARQVPA 
LAKLLEARDQ LANLLRYMDG KVDAETRLRK LLSDPELMAA LKSRIGATKD AEAETAKTAD 
GDA