Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2357 |
Symbol | |
ID | 7090341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 2565212 |
End bp | 2567071 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643465679 |
Product | type VI secretion system Vgr family protein |
Protein accession | YP_002362649 |
Protein GI | 217978502 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.116837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCG AACTGACCCA AGACAAACGC GTCGCCTCGC TTGAGACGCC TCTCGGCAAG GACAAGCTCG TCTGCCTGCG CTTCGACGGC GCCGAAGGCT TGAGCGAATT GTTCGAATAT CGCGTCGAGG CGCTGAGCAC CGAGGCGAAT GTCGATTTCG ACAAGGCGAT CGGCAATAAT TGCTCGGTCA CGTTCAAATC CTATTCCGAT CCCGATCGCG TCTTCAACGG CGTCCTCGTC GAGGCGCAGG CTCTCGGCGC GCAAGCTGGC CTCAATCTCT ACAGGCTGAC GCTAAAGCCC TGGCTGTGGC TGTTGTCGCG CACGAGCGAC TGCCGCATCT TCGAGAATCA GACGGCGGTC GACATCATCA AGAAGGTGTT TTCCGACCGC GGCTTCTCCG ACTACAGGGT TGCGACGACG GGCAAGTTTC CGGAGCTCGA ATATTGCGTC CAGTATCGCG AGACCGACCT CGCCTTCGTC TCAAGGTTGA TGGAGCAGCA CGGAATCTAC TATTTCTTCG AGCATCAGAA GGACAAGCAC ACGCTGGTGC TGGCCGACGC CAAATCGTCG CACAAGCCGG TTCCCGGCCA CGCCGAGACG CCCTTCATCG GCGATGAGCG GCAGACGCGG CGCGAGCGCG AGCATATTTC AAAGTGGACG CCCGAGCGCC GCTTCCGCAG CGGCAAGTTT GAGCTCAACG ATTATGATTA TCTGCAGCCG AACGCCGATC TGAAAAGCGA CGCCGAAGGG CAAGCGTCCT ACACCAAGTC GAAGATGGAG ATCTACGACT ATCCCGGCAA ATTCAAAAAG AAGAATGACG GCGAGACCTA TGCGAAGGTC AGGCTGCAGG CGGAGCAGGC GATGGACAAG CGCCGCTACG CCGACGGCGA TTCGGTCAGC CTCTTGCCAG GCGGCCTGAC GACGCTGAAG GATCATCCGG AAGGCGGCGA GAACAAGGAA TATCTCGTTC TGCGCGCGCT CCATTCTTAT TCGTCGCAAG CCTACAGGTC CGGCGGTTCG CAGGGAGCGG ACCTTTATTC CGGACGTTAC GAGCTGTTGC CGAGCGACGT CAATTACCGC GCGCCTTTGG CGACGCCGCG GCCGATCGTC TACGGGCCGC AGACGGCCAA GGTGGTTGGC AAGGACGGCG AGGAAATCGA CGTCGACGAG CACGGCCGCA TTCTTGTGCG CTTCTACTGG GACCGCAAGA ACAAGCAGTC GTGCCGCGTC CGCGTCGCGC AGGTGTGGGC CGGCAAGGGC TGGGGCGGCC AGGCGATTCC GCGCATCGGC CAGGAAGTCG TCGTCGAGTT TCTCGAAGGC GATCCCGATC GCCCGCTCGT CACCGGCGCC GTCTACAATG GCGACAACAA ATACCCGTAT GAAATGCCCG CCAACAAGAC GCAATCCGGG CTCAAGTCGG ATTCCTCGAA AGGCCATGGC GGCTACAATG AATTTATGTT CGAGGACAAG AAGGGCTCGG AAAAAATCCG GATGCATGGC GAGCGCGATC ATGAGGTCGT CATCCGCCGC GCCGAGACGA AAGAGGTCGG CGAGATCTTT TCAAGCCGCA GCGATCCCTC GCGCGACACC ACACTGAAGA ACGGCAGCGA CAATCTGTCG ATCCAGAACG GCAACCAAAC GGTCGACATC AAGGGCAAGC AGGACGTCAG CGTGCTCGAG ACGATCAGCA TCGAGGCGAT CCAGAAGATC ACGCTGACGG TCGGCGCCAG CACGATCACC ATGGAGCCGG CGCAGATCAC GATCAATTCG CCGATGATCA CCGTGCAGTC GTCTCTGGCG ACCAAGATTT CCGGCGGCAT GGCGATCAAT CTCGACGCCG CGATCATCAA GATCAATTGA
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Protein sequence | MTSELTQDKR VASLETPLGK DKLVCLRFDG AEGLSELFEY RVEALSTEAN VDFDKAIGNN CSVTFKSYSD PDRVFNGVLV EAQALGAQAG LNLYRLTLKP WLWLLSRTSD CRIFENQTAV DIIKKVFSDR GFSDYRVATT GKFPELEYCV QYRETDLAFV SRLMEQHGIY YFFEHQKDKH TLVLADAKSS HKPVPGHAET PFIGDERQTR REREHISKWT PERRFRSGKF ELNDYDYLQP NADLKSDAEG QASYTKSKME IYDYPGKFKK KNDGETYAKV RLQAEQAMDK RRYADGDSVS LLPGGLTTLK DHPEGGENKE YLVLRALHSY SSQAYRSGGS QGADLYSGRY ELLPSDVNYR APLATPRPIV YGPQTAKVVG KDGEEIDVDE HGRILVRFYW DRKNKQSCRV RVAQVWAGKG WGGQAIPRIG QEVVVEFLEG DPDRPLVTGA VYNGDNKYPY EMPANKTQSG LKSDSSKGHG GYNEFMFEDK KGSEKIRMHG ERDHEVVIRR AETKEVGEIF SSRSDPSRDT TLKNGSDNLS IQNGNQTVDI KGKQDVSVLE TISIEAIQKI TLTVGASTIT MEPAQITINS PMITVQSSLA TKISGGMAIN LDAAIIKIN
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