Gene Msil_2355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2355 
Symbol 
ID7090339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2563246 
End bp2564607 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content69% 
IMG OID643465677 
ProductFHA domain containing protein 
Protein accessionYP_002362647 
Protein GI217978500 
COG category[T] Signal transduction mechanisms 
COG ID[COG3456] Uncharacterized conserved protein, contains FHA domain 
TIGRFAM ID[TIGR03354] type VI secretion system FHA domain protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.177803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGA AACTCGCAAT CGAAAATATG ACCAATCTGC CCGATGGCGG CCCGGTCAGC 
ATCACCGTCA CCGGCAAGCG CGGCGTCGAT ATCGGCCGCG ACGCGCATCT TGACTGGACG
CTGCCGGACC CGAGCCGCTT CATCTCGGGG AAACATTGCG AGATCCGCTT CGAGGGCGGC
GCCTATGTGC TGACCGACGT CTCCTCGAAC GGCACCTTTC TCAACGAGCA GCCGCATCGC
ATGCGCGAGC CGCACCGACT GCGCAACGGC GACCGTCTGC TGATCGGGCA ATATGTCGTT
GCGGTTTCGC TTGACGGGAC GGAGGAGCGC GAGGAGTCGG CGGCGCCGGC GCTAGGGCGC
CGCCCGCTCG ACGCCGATTT GTGGGAATCG GGCGAACCGG TCCCCGAGCC GATCGATCCG
CGCGTGCTGA AGCCTGTTCC GGAGCGGGCG AAGGGGCCGG ATTTCCTGGA CTGGGCGATG
GATGTCTTCG ATCCGTTGAG CCCCACGCCG GCAAAGCCCA ATGCGGCCAG CCGGTTCGAG
GACGCAAGCT GGCTGCCGCC GCCGCCAACG GCGCCGGTCG CGCCGCCCCC GCCGGAAGCG
CCCGCGCCGC GCCGGCCGGT CTGGTCCGCG GACGACGCCG AGCCGCCCGC GCGAGTCTCC
GCTCCGCCGG CCCCGCCCGT GATGCCGCCC CCGGCTCCGG CCGAAGCGCC GCCGGCTTCT
CCCCCTCCGC CCGCGCCGAT CGCGCCCGCG GCGCCGCCGG TTCGCGCGGA GAACACCGAC
GCGGCGGGGG CGCGCTTCGT GCGGCGCTTC GCCGAGGCCG CCGGCCTGCC GCCGGAGGCG
ATCGCCAAGC AGGACGCCGA TGAATTGGCG GCCGAGCTCG GCGCGCTGAT GAAGCTCGTC
ACTGAGGATT TGCGTCAGCT CCTCGGCGCA AGGCTGGAGG TCAAGCGCAT GGCGCGGGCG
AGCCAGACGA CGATCCGCGC CGCCGACAAC AACCCCCTGA AATTTTCGCC GACGACCGAG
GACGCGCTGC GGCAGATGTT CGGGGCGCCG ACGCGCAGCT ATCTGCCCGC GGGCGCCGCG
CTGAAACAGG GCTTTGAGGA TCTCAAACGC CACCAGCTCC AGTCGGCCTC GGCCATGCAG
GGCGCCGTGA AAATGCTCAC CGAAGATCTC GATCCGGATC GGATCGAGCA GGAGATCGCG
CCGGACAGCG GCCTCTCCGG GCTTTTCTCG GCGCGCAAGG GCAAGCTCTG GGACGCCTAT
GTGGCGCGCT TTAAAGCCAA GACACATCGC CATGGCGATG GCCTGATCGG CGCCTTCATG
CTCTACTTCT CGCAATGCTA TGATCAAACG CACAAACAAT AG
 
Protein sequence
MALKLAIENM TNLPDGGPVS ITVTGKRGVD IGRDAHLDWT LPDPSRFISG KHCEIRFEGG 
AYVLTDVSSN GTFLNEQPHR MREPHRLRNG DRLLIGQYVV AVSLDGTEER EESAAPALGR
RPLDADLWES GEPVPEPIDP RVLKPVPERA KGPDFLDWAM DVFDPLSPTP AKPNAASRFE
DASWLPPPPT APVAPPPPEA PAPRRPVWSA DDAEPPARVS APPAPPVMPP PAPAEAPPAS
PPPPAPIAPA APPVRAENTD AAGARFVRRF AEAAGLPPEA IAKQDADELA AELGALMKLV
TEDLRQLLGA RLEVKRMARA SQTTIRAADN NPLKFSPTTE DALRQMFGAP TRSYLPAGAA
LKQGFEDLKR HQLQSASAMQ GAVKMLTEDL DPDRIEQEIA PDSGLSGLFS ARKGKLWDAY
VARFKAKTHR HGDGLIGAFM LYFSQCYDQT HKQ