Gene Msil_2351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2351 
Symbol 
ID7090335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2556087 
End bp2556788 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content70% 
IMG OID643465673 
Producttype VI secretion-associated protein, BMA_A0400 family 
Protein accessionYP_002362643 
Protein GI217978496 
COG category[S] Function unknown 
COG ID[COG3913] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03373] type VI secretion-associated protein, BMA_A0400 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.976848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCT GCGGCCTCAT CGGCAAGATC GCCGCAAAGC CCGACTATGT CGCCCTCGAC 
GCGCCGGCGC CCCTGCTGGC GGCGATGGAG CCGTGGCTGC ACGCGTCCAT CGCCTCCAGC
CGTCTGATGC TTGGCGAGTC GTGGCAGGGC GTCTTCCGCG CCGCGCCGAT CTGGCGGTTC
TGGCTTGGCG CAGAGATCGC CGGCGCGCCT GTCCTTGGCG CCTTGGCGCC CTCGATCGAC
GCCGGCGGCC GCTATTTCCC GCTGATCGCT TTCGCCTCCA GCGAGGCGGC AATAGCGATT
TTGCCGCCCG AATTTGCCGA TCACGACGCC TGGTTCAAAG CCGCCGAAGC GCTGCTGCTC
GCCTCCCTTG GGCAAGGGGC GAGCTATGAG GCGACGGTCG CCGCCGTCGA GCGCCTGCCT
GCGCCCGCCT GCGCGCCCGC CGTCGCGATC CGGCCGCCGC TGGCTGCGCT CGCGGGCGGC
GTCACCGCGC CGCTCGACGA CAAGCCGCTG GCGGAGGTGT TTTCCTGGCT TCGTCGCGCC
GACTGGGGCA AATCCTATGG CGCGCGCAGT TTCTGGTGGA CGGCTGGCGG CGTCAGTTTT
CGCCCGCGCG CGCTTGGTTT TTATCATCTG CCCGACCCGT CGCTGTTTGC CGCCATGCTG
ACGGGTGAAT TTTCTGGCGG CTCCGGCGCC GGGATGGGAT AA
 
Protein sequence
MMRCGLIGKI AAKPDYVALD APAPLLAAME PWLHASIASS RLMLGESWQG VFRAAPIWRF 
WLGAEIAGAP VLGALAPSID AGGRYFPLIA FASSEAAIAI LPPEFADHDA WFKAAEALLL
ASLGQGASYE ATVAAVERLP APACAPAVAI RPPLAALAGG VTAPLDDKPL AEVFSWLRRA
DWGKSYGARS FWWTAGGVSF RPRALGFYHL PDPSLFAAML TGEFSGGSGA GMG