| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2322 |
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| Symbol | |
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| ID | 7090306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2517000 |
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| End bp | 2519807 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643465645 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002362615 |
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| Protein GI | 217978468 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0205826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGC CAAAATATGA AAGCGCGGCT GTTTCGGGTC AAGGCCATAG TCGCGACAAA
GCGCTGCTGC AGGTCGCGAT TACGCGGGCG TTCGCCTTTC TGAATTCCGG CCAACCGGAC
GAGGCGCTGG CGGAGCTCGG CGGACACGCC CAGCGGGCGG CGCGGAGCGA TCTCGCCTGT
TATGTCTTCG GGCTGATTTG CTTCAACGCC GGGGATCTGC GCGAGGCGCT GATCTGGTTC
GAGCGCGCGC TCGCCTTGAA GCCCGATTAT TTCGAGGTGC TCAGCGCGCG CGCCATCGTG
CTGCAAAGAC TCGGCCAGCC CGAGGATGCG CTCGAGGCTT TTGAGGACAT CCTGAAACTG
CGCCCGAACG ACGCCGACGC GCTGTTCAGC ATCGGCGTCA TTTTACAGAG TCTTGGCCGC
ATGAACGAAG CGCTCGTCTC CTATGAAGGC GCTTTGCGGG CGCAGCCCAA GCATTGCGAG
GCGTTGACCA ATCGCGGCGC TCTGCTCGAA CGATTTGGCC GTCTTACTGA GGCGCTGTCC
TGTTTCGAAG CGATCATCGC GCTGCGCCCC AACAATGGCG GAGCCCTCTT CAACAAGGGC
TCGGTGCTGC AAAAGCTCGG CCGCAACGAA GACGCGCTCG CCGCCTATGA GGCGGCGGCG
CAATCCGGGC CGCCCGATCC CGAGACCGAG CTCAATCGCG GCAATGTGTT GCAAAAACTC
GGACGGCTCG ATGAAGCGAT CGTCTGCTAC GACCGCGCAG CGCGCCGGCC TGGGGGTTAT
CCGCAGGCGC TCTACAACAA GGGCATTGCT TTGCAGGCGC TGGGCCGGCG GTCGGCCGCC
CTTGCCGCTT ATGACGCGGC TCTCGTGCTC GACCCCCGCT ACTGCGAGGC GATCTGCAAT
CGCGGCAATC TGTTGCATGA ACTCGGCCGG CTCGAGGACG CCTATATGGC CTATGCCGCG
GCGCTGAAAA TCAGGCCCGC GTTCCTGCCG GCGCTGACCA ACCGCGCCAA TATCTGCCTG
CAATGGGGCC GCCTCGACGA AGCGATCCGC CATTGCGACG AGGCGTTGCG GCATGATCCA
AAATACCCGC AGGCGTTGGG CTTGCGCGGC GCGGCGCTGC ACCGCCTTGG GCGGCTCGAG
GAGGCGCTCG TTTCGCTCGA CCTTGCCGTG TCCGTCCGAC CGGCCGCGCC GGAGGCCTGG
CTCAATCGCG GCAACGTCTT GCAGGAGATG GACCGGCTCG CCGACGCCGT CGCCTCCTAC
CATGAGGCGC TCCGGCTTTC CCCTCATTAT CCGGAGGCGC TGTCAAGCCT TGGCGTCGCT
CTGAAGGAAC AGGGGGATGT CGACGAAGCG CTTGCATGTT TCAACGAGGC CATACACTAC
AAGCCAGACT ATCCAGATGC GCGCAACAAC AGGGCCGGAG CGCTGTTGCT GATGGGGAGG
CTGAAAGAAG GTTTTCGCGA CTTTGAAAGT CGTTGGGATC GATCCAACGC GCCGCCGAGA
CCCATCATTC CCGCGGCGGC CCGGTGGACC GGCGAGGATC TGACGGGCAA AAAAATTCTC
GTTTACGATG AACAGGGGCT TGGCGATCTC ATCCAGTTCT GCCGCTACAT TCCCTTGCTT
GAGGAGCGCG GGGCTGAAGT CACCCTGTTG TGCCGCAGGA CCATGCAAAG GCTGCTGCGC
AGCCTGGATT CCCGCGTTCG GATGATCGAC TCCCTGGACC CTCAAGACCG GTATGATTTT
GCATCCGCCT TGCTCAGTCT GCCAGGCGGA TTCGGCGCGG AGCTCGAAAC GATTCCGGCG
CAGACGCCTT ATCTTTTCGC GGAGCCCCAG GCTGTCGCCC AGTGGTCGCA GCGCATCGGC
CCCGAAGGAT TTCGGATCGG CATATGCTGG CGCGGAAATT CCGCGATCAA TTTGAAGCGC
GGCTTTTCCC TGGACTGCCT CGGCCCGATC GCCGCGATCG AGGGCGCGCG CCTGATCGGC
CTGGTCAAGG GCGAAGGGCC GATGGAAATC GAGACGCCGC AGGGATCGGC GCGCATCGAA
GGGCCGGGGC CCGATTATGA CGCAGGGCCG GACGCCTTTA TCGATTGCGC CGCCGTGATG
GAATCTCTGG ATCTCGTCAT CACGTCGGAC ACCGCCATAG CCCATCTCGC CGGCGCGCTT
GGACGGCCTG TGTTCGTCGC CCTGAAACAT GCGCCGGACT GGCGATGGCT GCTGCATCGT
CTAGATTCGC CATGGTATCC GACGATGCGG TTGTTCCGCC AAAAGGAGCG CGATCAATGG
CGGCCCGTTT TCGATGAAAT GGCTGCGGCG GTCGGCGCGC TTGTCCGCGG CGTCGGCAAT
TCTATCCCGC CGCCCGATTT GTCTTCCAGC GATCAGAGCG TCGCGGCAGG ACCGCACGCG
CTCCAACCTG AAGACCCGCC GGCGCTCATC GCCATACCGG CAGGCGTTGG CGAACTCATC
GACAAGATCA CAATTCTTGA GATCAAGGAG CGCCGCGTCG ACGATCCGGC CAAGCTGCAC
AACATACGCT TCGAACTCGC CCTGTTGCGC AAGCTTCGAG ATGAGCACGA TCTGTCGGAC
CCTGCGCTCG CGCGTCTTGA GGCGGAGTTA AGAAAGGCCA ATGAATCTCT GTGGGATGTC
GAAGACGCAT TGCGCTCGTG CGAATCGAAG AACAAATTCG ACGAGGAGTT TGTCTCTCTC
GCGCGACTTG TCTACACCTG CAACGACAAG CGCGCTCATG TGAAGAAAGA GATCAATCTG
TTGTTCAATT CCGCCATTAT CGAGGAGAAA TCCTACGCCC GCGCGTGA
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| Protein sequence | MSVPKYESAA VSGQGHSRDK ALLQVAITRA FAFLNSGQPD EALAELGGHA QRAARSDLAC
YVFGLICFNA GDLREALIWF ERALALKPDY FEVLSARAIV LQRLGQPEDA LEAFEDILKL
RPNDADALFS IGVILQSLGR MNEALVSYEG ALRAQPKHCE ALTNRGALLE RFGRLTEALS
CFEAIIALRP NNGGALFNKG SVLQKLGRNE DALAAYEAAA QSGPPDPETE LNRGNVLQKL
GRLDEAIVCY DRAARRPGGY PQALYNKGIA LQALGRRSAA LAAYDAALVL DPRYCEAICN
RGNLLHELGR LEDAYMAYAA ALKIRPAFLP ALTNRANICL QWGRLDEAIR HCDEALRHDP
KYPQALGLRG AALHRLGRLE EALVSLDLAV SVRPAAPEAW LNRGNVLQEM DRLADAVASY
HEALRLSPHY PEALSSLGVA LKEQGDVDEA LACFNEAIHY KPDYPDARNN RAGALLLMGR
LKEGFRDFES RWDRSNAPPR PIIPAAARWT GEDLTGKKIL VYDEQGLGDL IQFCRYIPLL
EERGAEVTLL CRRTMQRLLR SLDSRVRMID SLDPQDRYDF ASALLSLPGG FGAELETIPA
QTPYLFAEPQ AVAQWSQRIG PEGFRIGICW RGNSAINLKR GFSLDCLGPI AAIEGARLIG
LVKGEGPMEI ETPQGSARIE GPGPDYDAGP DAFIDCAAVM ESLDLVITSD TAIAHLAGAL
GRPVFVALKH APDWRWLLHR LDSPWYPTMR LFRQKERDQW RPVFDEMAAA VGALVRGVGN
SIPPPDLSSS DQSVAAGPHA LQPEDPPALI AIPAGVGELI DKITILEIKE RRVDDPAKLH
NIRFELALLR KLRDEHDLSD PALARLEAEL RKANESLWDV EDALRSCESK NKFDEEFVSL
ARLVYTCNDK RAHVKKEINL LFNSAIIEEK SYARA
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