| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2308 |
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| Symbol | |
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| ID | 7090292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2502188 |
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| End bp | 2503216 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643465631 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002362601 |
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| Protein GI | 217978454 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0234443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGG TTGAACCCGC CCTGCACGGC TCGACGGCGT CCGTCCACTC CTTCGCCGTC
GCGCCGGGCC GGGCGGGCGA GCGGCTCGAC CGCTTTCTCG CTGCTGAGAC CGCTGCCGCC
GGCGCGGACC TCTCCCGCAC CAGGCTGAAG ACGCTGATCG AGGGCGGCCA CGTCAGCGTC
AACGGCGTGA TCGTCACCGA GGCGAGCTTT GCCGTGCGCG CGGGCCAGGC GCTCGCCGTC
GCCGTGCCGC CCGCCGCCGA GCCGATCCCG GCCGGCGAGG CGATCGCCCT CGACATCCGT
TTTGAGGACG AACATCTCCT CGTGCTCGAC AAGCCGGCCG GGCTCGTCGT GCATCCGGGC
GCCGGCCACG AATCCGGCAC GCTCGTCAAT GCGCTGATCG CCCATTGCGG CGACAGCCTG
TCGGGGATTG GCGGCGTCAA AAGGCCGGGC ATCGTGCACC GGCTCGACAA GGACACCTCC
GGATTGATGG TCGTCGCCAA GACCGACCGG GCGCATCAGG GGCTGGCGCG GCTTTTCGCC
GATCACGGCC GCACGCTGCC GCTGCTGCGC GAATATCTCG CCTTTGTGTG GGGCGCTCCC
GACCGCGCTT CGGGGCTGGT CGACGCGCCG CTCGGACGCC ATCCCGTCGA TCGCGAAAAG
ATCGCCATCG TCGCGGCGGC GCGGGGGCGC CGGGCGGTCA CTCACTGGCG GCTGCTGGAG
CAATTGGGCC CCGAGGTCGC GGCGCTCGCC TGCCGTCTCG AGACAGGCCG CACGCATCAG
ATCCGCGTCC ATATGGCGAG CCTCGGCTGG CCGCTGCTGG GCGATCCCGT CTATGGGCGG
GGGTTCAAGA CCAAGGCGGG CCGGCTTCCG CCCGAGGCGC AGGCGGCGCT GATTGCGCTC
GGCCGGCAGG CGCTTCACGC CAGGGCGCTT GGCTTTGAAC ATCCCGTCAC GGGCGCGGCG
CTGGCTTTTG AAAGCGACCC GCCGCCTGAC ATGGCCGAGC TTCAGGCGGC CCTGAGGCGC
TCCGCTTAG
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| Protein sequence | MNPVEPALHG STASVHSFAV APGRAGERLD RFLAAETAAA GADLSRTRLK TLIEGGHVSV
NGVIVTEASF AVRAGQALAV AVPPAAEPIP AGEAIALDIR FEDEHLLVLD KPAGLVVHPG
AGHESGTLVN ALIAHCGDSL SGIGGVKRPG IVHRLDKDTS GLMVVAKTDR AHQGLARLFA
DHGRTLPLLR EYLAFVWGAP DRASGLVDAP LGRHPVDREK IAIVAAARGR RAVTHWRLLE
QLGPEVAALA CRLETGRTHQ IRVHMASLGW PLLGDPVYGR GFKTKAGRLP PEAQAALIAL
GRQALHARAL GFEHPVTGAA LAFESDPPPD MAELQAALRR SA
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