| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2297 |
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| Symbol | |
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| ID | 7090281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2489201 |
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| End bp | 2490799 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643465620 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_002362590 |
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| Protein GI | 217978443 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0358902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCA GCGCCAACAG GCTCGAACTT TTGCAGATCG CCGACGCGGT GGCGCGGGAA
AAATCGATCG ACCGTCAAAT CGTTCTCTCC TCGATGGAGG ATGCGATCCA GAAGGCGGCG
CGCTCGCGCT ACGGTCAGGA GACCGAGGTT CGCGCCGAGA TCAATCCGAA GACCGGCGAA
ATCCGCTTCT CGCGCCTGCT GCTGGTGGTC GATCAGATTG AAAATGACGC CATCCACATC
ACGCTTGAGG ACGCCCGCAA GAAGAACCCG GCGGCGCAGG TCGGCGACTG GATCGCCGAG
ACCCTGCCGC CGTTTGACTT TGGCCGCATC GCCGCCCAGT CGGCGAAGCA GGTCATCGTG
CAGAAGGTGC GCGAGGCCGA GCGCGACCGT CAGTATCAGG AATATAAGGA TCGCATCGGC
GACATCGTCA ACGGCGTCGT CAAGCGCGTC GAATATGGCA ATGTGATCAT CGATCTCGGG
CGCGGCGAGG CGACGATCCG CCGCGACGAA ATGATCCCGC GCGAGATGTT CCGGCCGGGC
GACCGCGCCA GGGCCTATGT CTATGACGTG CGCCGCGAAC AGCGCGGGCC GCAGATTTTC
CTCTCGCGCA CGCATCCGCA GTTCATGGCC AAGCTGTTCC AGCAGGAAGT GCCGGAAATC
TACGACAATA TCATCCAGGT GAAGGCGGTC GCCCGCGACC CGGGCTCCCG CGCCAAAATC
GCGGTGATTT CGCGCGACGC CTCGATCGAT CCGGTCGGCG CCTGCGTCGG CATGCGCGGC
TCGCGCGTGC AGGCCGTCGT GAATGAATTG CAGGGCGAGA AGATCGACAT CATCCCCTGG
TCGCCGGACG CCGCGACCTT CATCGTCAAT GCGCTGCAGC CGGCCGAAGT GGTCAAGGTC
GTGCTTGACG AAGACTCGGC GCGTATTGAA GTTGTGGTGC CAGATGACCA ATTGTCATTG
GCGATCGGAC GCCGCGGCCA GAACGTCCGC CTCGCCTCGC AGCTGACCGG CTGGGACATC
GACATCCTGA CCGAGGCCGA GGAATCGGAG CGCCGGCAGA AGGAGTTCGT CGAGCGCACC
AACGCCTTCA TGAACGCGCT CGACGTCGAT GAGGTGGTCG GCCAATTGCT CGCCTCGGAA
GGTTTCCGGT CGGTGGAGGA GCTCGCTTTC GTCGAGCCGG CCGAGCTGGC CGCGATCGAA
GGCTTTGACG AAGACACCGC CGTCGAGATC CAGGCGCGGG CGCAGGACTA TCTGGCGCGC
ATCGAGGCCG AGCAGGACCA GCGCCGCATC GAACTTGGCG TCGCCGACGA GCTCCGGGAG
GTCGCCGGCG TCACCACGGC GATGCTGGTC AAATTCGGCG AGAACGACGT CAAGACGGTC
GAGGACCTCG CCGGCTGCGC GACCGACGAT CTGATCGGCT GGACCGAGCG CAAGGAAGGC
GAAAGCGTCA AGCACGCCGG CTATCTCGAT GGCTTCGAGC TGACCCGCGA AGAGGCCGAG
ACGATGATCA TGACCGCCCG CGTTCATGCC GGCTGGATTG ACGCCATCCC GCAGCCCGCG
GTTGAAGAGC CGCAGCTCGA GGGAGAGGTT CGGGACTGA
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| Protein sequence | MAVSANRLEL LQIADAVARE KSIDRQIVLS SMEDAIQKAA RSRYGQETEV RAEINPKTGE
IRFSRLLLVV DQIENDAIHI TLEDARKKNP AAQVGDWIAE TLPPFDFGRI AAQSAKQVIV
QKVREAERDR QYQEYKDRIG DIVNGVVKRV EYGNVIIDLG RGEATIRRDE MIPREMFRPG
DRARAYVYDV RREQRGPQIF LSRTHPQFMA KLFQQEVPEI YDNIIQVKAV ARDPGSRAKI
AVISRDASID PVGACVGMRG SRVQAVVNEL QGEKIDIIPW SPDAATFIVN ALQPAEVVKV
VLDEDSARIE VVVPDDQLSL AIGRRGQNVR LASQLTGWDI DILTEAEESE RRQKEFVERT
NAFMNALDVD EVVGQLLASE GFRSVEELAF VEPAELAAIE GFDEDTAVEI QARAQDYLAR
IEAEQDQRRI ELGVADELRE VAGVTTAMLV KFGENDVKTV EDLAGCATDD LIGWTERKEG
ESVKHAGYLD GFELTREEAE TMIMTARVHA GWIDAIPQPA VEEPQLEGEV RD
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