| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2260 |
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| Symbol | |
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| ID | 7091387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2449517 |
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| End bp | 2451322 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643465586 |
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| Product | PQQ-dependent dehydrogenase, methanol/ethanol family |
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| Protein accession | YP_002362556 |
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| Protein GI | 217978409 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGCAAC CTACCGGCCG ATTTATCGGG TGCGGACGGA TGCGATTAAG ACTTTTGATC
GGGGCGGCCT GTGCGCTTGC GGCGATAACG CCGGGCGCAC AGGCCGGGAG CGCGGCAAAC
GCTGATTCTG ATTACGCCAA TCTCCGCTAT TCGTCGTTGA GCGAGATCAA CGTCGACACG
GTTCAAAACC TTGCCCCGGT CTGGACCTTT TCGACCGGCG TTCTGCGCGG CCATGAAGGC
GCGCCCCTCG TCGCCGGCGG CGCGCTCTAT CTGGTGACGC CTTTTCCCAA TCGCGTGTAC
GCGCTCGATA TCGCCCATGA GGGCAAGATC CTGTGGCAAT ATGAGCCAAG GCAGGACGCC
GGCGTCGTCG CCGTGATGTG CTGCGACGTC GTGAGTCGCG GTCTCGCCTA TGGCTTTGGC
AAGATTTTTC TCTACCAGGC TGACGCGACG CTGGTCGCGC TCGACGCCGT CACAGGCAAG
CCCGCTTGGT CGGTCAAGAA CGGCGATCCG GCCAAGGGAG CGACGGGAAC CTCGGCGCCA
ATCGTCGTCA AGGACAAGGT TCTGGTCGGC GTCGCCGGCG GCGAATTTGG CCTGCGCGGC
TATCTCACCG CCTATGACGC CGCGACAGGC GCAAAAATCT GGCGCGCCTA CTCGACCGGC
CCCGACTCCG AGACGCTGAT CGATCCAGTC ACAACGCGGG AGCTCGGCCG CAGCGTCGGC
GCGGAAGCGA GCCTCAAGAG CTGGAGCGGC GACCAGTGGG CGCTCGGCGG CGGGGCGCCC
TGGGGCCGCA TCTCCTACGA TCCCGGCCTC AACCTCGTCT ATTATGGGAC CGGCAACCCC
TCGACCTGGA ACCCGGCGCA GCGCCCGGGC GACAACAAAT GGGCGATGAC GATCCTCGCC
CGCAACGCCG ATACGGGCGA GGCGGCCTGG CTGTACCAGA TGATCCCGCA TGATCAATGG
GACTATGACG GCGTCAATGA GATGATCCTT GGCGAGGCCG CGATCGACGG GCGGGCGCGC
AAAACGCTCA CGCATTTTGA TCGCAACGGC TTCGTCTATG TGCTCGACCG CGCCGATGGA
GAATTGCTCA GCGCCGACAA ATATGACCCT GCCGTCAATT GGGCCAGCCG CGTCGATCTC
GGTAAAAGCT CGAAAGCCTA CGGCCGTCCG GTGCTGGACA ACGCCTATTC GACCGAGGCC
AATGGCGAAG AAACAGTCAC GCACAATATC TGCCCGGCGA CGGTCGGCGC CAAAAACGCC
AATCCCGCGG CCTATTCAGA GCAGACCGGC CTCTTCTATG CGCCGATGAT CCGCCTCTGC
ATGGACTATG AGCCGTTTCA CATCGCCTAT GCGCAAGGCC AGCCCTATAC GGGCGCGGAT
ACGGCGGTCT ATCCCCAGAA GGGCGCGGCC GATATGGGAG GATTGACGGC CTGGGACGCC
GACGCGCGGC GGGAAATCTG GTCGATCAGG GAGCGTTTCG CCGTCGTCTC CGGCGCGCTG
GCGACGGCGG GCGGGCTCGT CTTCTACGGC ACGCTCGAGG GCTATCTGAA GGCCGTCGAC
GCAAAATCCG GCAAGGAGCT CTATCGCTTC AAGACCCCGT CCGGAATCGT CGGCGACGTT
GCGGCGTTCG ACAACGGAGG ACGGGAGTAT ATCGCGGTGT TGTCCGGCGT CGGCGGATGG
GCCGGGGCCG GTCTCACGGC GGGGCTGACG CAGACGCCGG AGGGCGCCAA TTCGCCGGAG
GTTTACGCGG CGCTCGCGCA GTACACGGCT CTTGGCGGCC AGCTCACGGT GTTCGCCTTG
CCGTGA
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| Protein sequence | MPQPTGRFIG CGRMRLRLLI GAACALAAIT PGAQAGSAAN ADSDYANLRY SSLSEINVDT
VQNLAPVWTF STGVLRGHEG APLVAGGALY LVTPFPNRVY ALDIAHEGKI LWQYEPRQDA
GVVAVMCCDV VSRGLAYGFG KIFLYQADAT LVALDAVTGK PAWSVKNGDP AKGATGTSAP
IVVKDKVLVG VAGGEFGLRG YLTAYDAATG AKIWRAYSTG PDSETLIDPV TTRELGRSVG
AEASLKSWSG DQWALGGGAP WGRISYDPGL NLVYYGTGNP STWNPAQRPG DNKWAMTILA
RNADTGEAAW LYQMIPHDQW DYDGVNEMIL GEAAIDGRAR KTLTHFDRNG FVYVLDRADG
ELLSADKYDP AVNWASRVDL GKSSKAYGRP VLDNAYSTEA NGEETVTHNI CPATVGAKNA
NPAAYSEQTG LFYAPMIRLC MDYEPFHIAY AQGQPYTGAD TAVYPQKGAA DMGGLTAWDA
DARREIWSIR ERFAVVSGAL ATAGGLVFYG TLEGYLKAVD AKSGKELYRF KTPSGIVGDV
AAFDNGGREY IAVLSGVGGW AGAGLTAGLT QTPEGANSPE VYAALAQYTA LGGQLTVFAL
P
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