| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2225 |
|---|
| Symbol | |
|---|
| ID | 7091347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2408015 |
|---|
| End bp | 2409052 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643465546 |
|---|
| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| Protein accession | YP_002362521 |
|---|
| Protein GI | 217978374 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.22667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATG CGCCTCGACC GGCAAAACCT TTGATCGCGC TGACCCGCGG CGATCCCTCA
GGGATAGGCC CCGAACTCGC GCTGAAGGCC TGGCGGCTGA CGCGCGAGGA TCCCGAGGCG
CCGGCATTTG TGATCGCCGC CGAGGCGGAC CATCTCGGCG CCCTCGCGCG CAGCCTTGGC
ATTGAGGCGC CTATCGCGCG GGTCGCCTCC GCCGCGGAGG CGCTCGAAGC GTTCTCCCGC
TCGCTGCCCG TGCTCGATTC GAAAGGCGGC GTCAAAGGCG CTCCCGGAAA GCCGCATCCG
GACGATGCGG CGGCGACGAT CGCCTCGATC GAGACCTGCG TCGACCTTGT CGCGCGCGGC
GAGGCGGCGG CGGTCGTCAC CAATCCGATC GCCAAGGAGA TTCTTTATCG CGCCGGCTTC
GCGCATCCGG GGCATACGGA ATTTCTCGGG GTTCTGGCCG AGCGCCTCAC GGGACGCAAG
GTTCTTCCCG TGATGCTGCT GTGGTCGCCT GAACTCGCCG TCGTCCCGGC GACGATCCAT
ATCGCCTTGA AGGACGTTCC GGGGCGCCTC TCGACGGAGT TGCTGATCCG GACCGGCCAA
ATCGTATCGG ATGACTTTCA GCAGAGGTTC GGCGTCGCGC GGCCGCGGCT TGCCTTTACC
GGGCTCAATC CCCACGCCGG CGAGGGCGGG GCCATGGGAC GCGAGGAGAT CGACATCATC
GCCCCGGCGC TTACAGCCCT GCGCGAGGCG GGCGTCTGCG TCAGCGGCCC GCATCCTGCA
GACACCATGT TTCACGCCAA GGCGCGCGAG AGCTATGACG TCGCGATCGC CATGTATCAC
GATCAGGCGC TGATTCCGAT CAAGACGCTC GCTTTCGACC ATGGCGTGAA TGTGACGCTC
GGCCTGTCTT TCATCCGGAC CTCCCCAGAT CATGGCACGG CCTTCGGCAT CGCCGGTCAG
GGCGTCGCCG ATCCCTCGAG CCTCATCGCC GCGCTGAAAC TTGCCGGCCG GCTCGCGCGC
CGGGCTCTTT CAAGCTGA
|
|---|
| Protein sequence | MIDAPRPAKP LIALTRGDPS GIGPELALKA WRLTREDPEA PAFVIAAEAD HLGALARSLG
IEAPIARVAS AAEALEAFSR SLPVLDSKGG VKGAPGKPHP DDAAATIASI ETCVDLVARG
EAAAVVTNPI AKEILYRAGF AHPGHTEFLG VLAERLTGRK VLPVMLLWSP ELAVVPATIH
IALKDVPGRL STELLIRTGQ IVSDDFQQRF GVARPRLAFT GLNPHAGEGG AMGREEIDII
APALTALREA GVCVSGPHPA DTMFHAKARE SYDVAIAMYH DQALIPIKTL AFDHGVNVTL
GLSFIRTSPD HGTAFGIAGQ GVADPSSLIA ALKLAGRLAR RALSS
|
|---|
| |