Gene Msil_2082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2082 
Symbol 
ID7091448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2256068 
End bp2257438 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content66% 
IMG OID643465406 
Productinner-membrane translocator 
Protein accessionYP_002362383 
Protein GI217978236 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCT CGCTGACGCC GGCCCGCTCC CGCTCCCGCC TCAAAGACGC CCTGACCGGC 
GCGGCGATCG CGGGCGCAAT CATGTTCGGG CTATGCTTTC CCATCCTCGC CTTCCGGACC
GATCAGAATT TCTCCAACGA ACTCTATCTT CTGAGCCGCT GGCCGGCGGT CGCCTTCGCG
GTCGGCGCAG TCTTCGTCCT GCGCTTTGCC ATGCTGATGC TGCCGCCGCG CGAGCCGCGC
CCGCAAGCTC CGCCCTCGCC GGCGCGGGCA GGCGCCTTGC AAAGACTGGC GCGCTATGCC
GGCGCCGTGG GAATCCTTGC GCTGATCGCC TTTCCGCTGG TCATGGTGGC CCTGCTCGGC
CCCGCCGGAG CGCAGAAATG GATCGATAAT TTCGGCGTCC AGATCCTGCT CTATGTGCTG
CTCGGCTGGG GACTCAATAT CGTCGTCGGC CTCGCCGGGC TGCTCGACCT CGGCTATGTC
GCCTTTTACG CGGTCGGCGC CTACGCCTAT GCGCTGCTCG CCACCCATTT CGGCTGGTCG
TTCTGGCTTT GCCTTCCCGT CGCGGGACTT CTGGCCGCGG GCTTTGGCGT CGCGCTTGGA
CTTCCCGTGC TGCGCCTGCG CGGCGATTAT CTCGCCATCG TCACAATGGC CTTTGGCGAA
ATCATCCGCC TCGTCCTCAC CAACTGGACG GCGCTGACCA ATGGCGACGC AGGCATCAGC
TCGATCCCGC GCATCACCTT TTTCGGCTGG CCTTTTATCG CCGGGCCAAA CGGCTTCGCC
GCGCTGTTTG GCCTGAAATT CGCCCCCGTG CACCGCCTGA TCTTCCTCTT TTATCTCATT
CTGGCGCTGG CTCTTTGCGT CAACTATCTG ACGCGGCGCC TGCGCAAGGC GCCGCTCGGG
CGCGCCTTTG AGGCCCTGCG CGAAGACGAG ATCGCCTGCC GCTCGCTCGG GGTCGACACG
GTGGCGACGA AGCTCACGGC CTTCGCGCTC GGCGCCTCGA TCGCCGGCAT GGCCGGGGCG
CTGTTCGCGG CGCGGCAGAA TTTCGTCTCG CCGACGAGCT TCACCTTCAT GGAATCTGCG
ACGATCCTGG CGCTTGTCGT GCTCGGCGGC GCGGGCTCGC AGCTCGGCGT CGCGCTGGCC
GCGATCGTCA TCATCGGCGG CTCGGAAATT TTGCGCGAGC TCGACGGACT GAAGCAGATC
TTCGGCCCGG CATTCGATCC GACGCAATAT CGCATGCTGA TCGTCGGCAT CGCCATGGTC
GGCATGATGA ACTGGCGCCC GCGCGGCCTG ATCGCCTTGC GCACGCCTTC GATTTTCCTG
AAAAAACCGA AGCTTGTCGT CGGCGCGCTG GCGGGAGAGG GCCGCGGCTG A
 
Protein sequence
MQSSLTPARS RSRLKDALTG AAIAGAIMFG LCFPILAFRT DQNFSNELYL LSRWPAVAFA 
VGAVFVLRFA MLMLPPREPR PQAPPSPARA GALQRLARYA GAVGILALIA FPLVMVALLG
PAGAQKWIDN FGVQILLYVL LGWGLNIVVG LAGLLDLGYV AFYAVGAYAY ALLATHFGWS
FWLCLPVAGL LAAGFGVALG LPVLRLRGDY LAIVTMAFGE IIRLVLTNWT ALTNGDAGIS
SIPRITFFGW PFIAGPNGFA ALFGLKFAPV HRLIFLFYLI LALALCVNYL TRRLRKAPLG
RAFEALREDE IACRSLGVDT VATKLTAFAL GASIAGMAGA LFAARQNFVS PTSFTFMESA
TILALVVLGG AGSQLGVALA AIVIIGGSEI LRELDGLKQI FGPAFDPTQY RMLIVGIAMV
GMMNWRPRGL IALRTPSIFL KKPKLVVGAL AGEGRG