Gene Msil_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1798 
Symbol 
ID7090915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1959078 
End bp1959287 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content56% 
IMG OID643465125 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_002362105 
Protein GI217977958 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACGG GAACTGTGAA GTGGTTCAAT CCAGACAAGG GATACGGCTT TATCCAGCCT 
GACGACGGCG GGAAAGACGT GTTCGTCCAC ATCAGCGCTG TGGAGCAATC AGGGTTGCGT
CACCTGCAGG AAGGCCAGAA GATCAACTAT GAAGTGATCG CGGACAAGCG GACCGGCAAA
TCGTCGGCCG GCAATCTTCG CGCAGCCTGA
 
Protein sequence
MTTGTVKWFN PDKGYGFIQP DDGGKDVFVH ISAVEQSGLR HLQEGQKINY EVIADKRTGK 
SSAGNLRAA