| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1659 |
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| Symbol | |
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| ID | 7093119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1794520 |
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| End bp | 1797648 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643464984 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_002361969 |
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| Protein GI | 217977822 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.626466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCG ACGCCGTCGT CGCCCCATTT TCGGTCCCTT ATGCGCCACC GGACGAGCCG
ATCGCCGCGC GCCTTCTGAA AGGCGACGCC CTCGACGCCG GGGCGGAGGC GCGGATCGAC
CAGCTTGGCC GTCGCTTGAT CGAGGCCGCG CGCGGCGCGA AAACTGCCCG TATCGGCGGG
CTTGAGGATC TGCTGCGCGA ATATTCGCTG TCGACGGAGG AAGGCGTCGC GCTGATGGTC
CTCGCCGAGG CGCTGCTGCG CGTGCCTGAT TCCCTGACCG CCGACGCCCT CATCGCCGAA
AAGATCGGCG CGGCGCGCTG GACCGCGGAG GGCGGCCATG AGGCGGAGCC GCTGGTTGTC
TCGGCCGCGG CCTGGGCCTT GGGAGCGACC GCCCGCATGC TCGACAAGGG CAAGACGGCC
GAAGGCGTCG TCGCTCTGGC GGCGAAGCGC TTGGGGCTGG GCGCGCTGCG CGCCGCCGCG
CGGCAGGCGA TGCAGTTGAT GGGACAGCAC TTCGTCTTTG GCGATGAGAT CGAGGAGGCG
CTGCGCCGCG CATCCTCGCG CGAGGGAAGA CGCCATCTTT ACTCCTTCGA CATGCTTGGA
GAAGGCGCGC GGACCAAGGC CGACGCCGAT CGCTATTTCC AGTCCTACGC CCACGCGATC
GAAAGCGTCG GCGGCGCGCG GGGAGCGGGA GCGTCGGAGC GGCTTGGCGT TTCGGTAAAA
CTCTCGGCGC TGCATCCGCG CTTCGAGCCC GCCTGCCGCG AGCGCGTGAT GAGCGAATTG
ACGCCGCGCC TGATCGACCT CGCGCGGCTC GCCAGGCGGC ATGATCTGCA ACTGACCATC
GACGCCGAAG AGGCGGACCG GCTCGAGCTT TCGCTCGACC TCATCGAGGC TGCGCTGGCC
GACGGATCGC TGAAAGACTG GGGCGGCTTT GGCCTCGCCG TGCAGGCCTA TCAGAAGCGC
GCCGAGGCGG TGATCGACCA TGTCGTAGAG CTTGCCTCCA GACATCGCAC GCGCATGACG
CTTCGGCTCG TCAAGGGCGC CTATTGGGAC GCCGAAATCA AGCGGGCGCA GGAGCGCGGC
CTTGCCGACT ATCCGGTCTT CACCCGCAAG GCGATGACGG ATCTGAACTA TATCGCCTGC
GCGAGGCGGC TGCTGGCGGC GCGCGCGCTG ATCGCGCCGC AATTCGCCAC CCATAATGCG
CTGACCGTCG CGACCATCGT GACGCTGGCC GGCGGCGTCG ACGGCTATGA GTTCCAGCGC
CTGCACGGCA TGGGGGAAGA GCTTTACGCC GCGCTTCGCG CGGATTATCC GGCGCTTGCC
TGCCGCATCT ACGCGCCGGT CGGCCGGCAT GAGAATCTGC TTGCCTATCT GGTGCGCCGC
CTTCTTGAGA ACGGCGCCAA CTCATCCTTT GTCGCGCAGA TCGGCGACCG CGATATTCCG
GCCGCGGCCC TGCTCGAACG GCCGCAGAAA ATCATCGGCG ACGCCGACCG CGCCCGCGCC
GCCGCGCTGC CGCCGCCGCA AGAGATTCAT GGGCCGGAAC GCAAAGTCGC GGCCGGGGTC
GAGTTCGGCG ACCGGCGGGC GCTGGGCGAT CTCCTCGCCG CGATCCGGCA AACGCCGGAG
GCGCGGCAGG CGGAGCTGAT TCTGGCAGGG GGCAAGAGGG CGCCGAACCC GGCCGCCGGG
CGGCGGCAGG CGATCTCGCC GATCGATGGC TCGGCGATCG GGCGGGTTGA GAACGCGGAC
GCGAGCGCTC TTGCGACGTT GATGCAGGAG GCGCAGGCCG CCGCAAAACT TTGGTCGAGG
CGCCCCGTCG AAGAACGCGC GGCGCGGCTC GATCGCGCGG CGCAAAGGCT GGAGGCGGAG
GCGCCGCGCT GGCTGCGCCT ACTTCAGCTC GAGGCCGGCA AGACGCTTGA CGACGCGGTC
GCCGAGTGGC GTGAGGCGAT CGATTTTCTG CGCTATTACG CGGCCTCGGC GCGCAAGGCG
TTCGGCGCCG CGCCGAAACT GCCGGGACCA ACCGGCGAGG ACAACAGGCT GCATTGCCAT
GGGCGCGGCG TTTTCGTCTG CATCAGCCCG TGGAATTTTC CGCTGGCGAT TTTTCTCGGA
CAGGTGGCCG CTGCGCTCGT CTCCGGCAAT AGCGTCATTG CCAAGCCGGC CGAGCAGACG
CCGCTGATCG CCGCCGAGGC CGTCGCGCTG CTGCATAAGG CCGGCGTTCC GGCCGGCGCG
CTCTGCCTTG CGCAGGGAGA CGGAAAAATC GGCGCCGCGC TTGTCGCGCT GCCGGGCGTT
GCCGGCGTCG CCTTTACCGG ATCGGTCGAA GCGGCGGCAA GCATCAACAG GGCGCTTGCC
GCAAAGGATG GGCCGATCGC GGCGCTGATC GCCGAGACGG GGGGCGTCAA CGCCATGATC
GTCGACGCCA CTGCTCTGCC CGAGCAGGTC GCGGACGATG TCGTCGCCTC GGCGTTCCGC
TCGGCGGGGC AGCGCTGCTC GGCGCTGCGT TTGTTGTGCC TGCAGGAAGA GGTGGCGGAT
AAAATGCTCA CGATGATCGC CGGAGCCGCC CGCGAGCTTC GCGTCGGCGA TCCGCGCGAC
ATCGGCGTGC AGATCGGCCC GGTGATCGAC GCCGACGCCA AGGCGGCGCT GCTCGCGCAC
ATTGAGGCGA TGCGCGCGCA AGTGCAGAAT GGCGTCATCG AGCATTTTGC TGGCGAAGTC
GGCGCGACCG CGCCCGCGCA TGGGTTTTAT GTCGCGCCTC ATATTTTTGA GCTCGCCTCG
CCCGCAGATC TTAAAGCGGA AGTGTTTGGA CCGATCCTCC ATGTCGTGCG CTACAAGGCG
GCGGAGCTTG ACCTGCTGCT TGACGCCATC GAGGCGAAAA ACTTCGGGCT GACGCTCGGC
GTCCATTCGC GCATCGAATC GACCATCGGC CGCATCCTCG AGCGGCGGCT TGCTGGCAAT
TGCTATGTCA ATCGCAATAT GATTGGCGCG GTCGTCGGGA CGCAGCCCTT TGGCGGCTTT
AACCTGTCCG GCACGGGGCC GAAAGCTGGC GGGCCGCACT ATCTGCAGCG TTTTGTCGTG
GAACAGACGG TCACGATCAA TACGGCGGCT GTCGGCGGCA ATGTTCATTT GCTCAATGCG
ATCGACTGA
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| Protein sequence | MTSDAVVAPF SVPYAPPDEP IAARLLKGDA LDAGAEARID QLGRRLIEAA RGAKTARIGG
LEDLLREYSL STEEGVALMV LAEALLRVPD SLTADALIAE KIGAARWTAE GGHEAEPLVV
SAAAWALGAT ARMLDKGKTA EGVVALAAKR LGLGALRAAA RQAMQLMGQH FVFGDEIEEA
LRRASSREGR RHLYSFDMLG EGARTKADAD RYFQSYAHAI ESVGGARGAG ASERLGVSVK
LSALHPRFEP ACRERVMSEL TPRLIDLARL ARRHDLQLTI DAEEADRLEL SLDLIEAALA
DGSLKDWGGF GLAVQAYQKR AEAVIDHVVE LASRHRTRMT LRLVKGAYWD AEIKRAQERG
LADYPVFTRK AMTDLNYIAC ARRLLAARAL IAPQFATHNA LTVATIVTLA GGVDGYEFQR
LHGMGEELYA ALRADYPALA CRIYAPVGRH ENLLAYLVRR LLENGANSSF VAQIGDRDIP
AAALLERPQK IIGDADRARA AALPPPQEIH GPERKVAAGV EFGDRRALGD LLAAIRQTPE
ARQAELILAG GKRAPNPAAG RRQAISPIDG SAIGRVENAD ASALATLMQE AQAAAKLWSR
RPVEERAARL DRAAQRLEAE APRWLRLLQL EAGKTLDDAV AEWREAIDFL RYYAASARKA
FGAAPKLPGP TGEDNRLHCH GRGVFVCISP WNFPLAIFLG QVAAALVSGN SVIAKPAEQT
PLIAAEAVAL LHKAGVPAGA LCLAQGDGKI GAALVALPGV AGVAFTGSVE AAASINRALA
AKDGPIAALI AETGGVNAMI VDATALPEQV ADDVVASAFR SAGQRCSALR LLCLQEEVAD
KMLTMIAGAA RELRVGDPRD IGVQIGPVID ADAKAALLAH IEAMRAQVQN GVIEHFAGEV
GATAPAHGFY VAPHIFELAS PADLKAEVFG PILHVVRYKA AELDLLLDAI EAKNFGLTLG
VHSRIESTIG RILERRLAGN CYVNRNMIGA VVGTQPFGGF NLSGTGPKAG GPHYLQRFVV
EQTVTINTAA VGGNVHLLNA ID
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