| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1622 |
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| Symbol | |
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| ID | 7090979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1752149 |
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| End bp | 1753345 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643464947 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_002361932 |
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| Protein GI | 217977785 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0014107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATTTTGG ATCAAGACAA AGCGCCGACC CCCGTTTGGC CGGCTCCGCG CCCGACCGCC
CTTCTGGTGC TTGCGAACGG CCTTGTGCTT GAGGGCGTCG GCCTGGGGGC GACCGGCGAG
GCGGTCGGCG AGGTTTGCTT CAACACGGCG ATGACCGGCT ATCAGGAAAT CCTGACTGAC
CCCTCCTATG CTGGCCAGAT CGTCACCTTC ACCTTTCCTC ACATCGGCAA TGTCGGGGCC
AATGACGAGG ACATCGAAAC CAGCAATCCG GCCGCCGCCG CCGGCGTGCG CGGCGCCATC
GTGCATGCGC CGATCACGGG CCCGTCAAAT TACCGCTCGA CGCGCCATTT CGACGGCTGG
CTCAAAAGCC GCGGCATTAT TGGCCTTTGC GGCGTCGACA CGCGGGCGCT GACCGCGCTG
ATTCGCGACA GCGGCATGCC GAATGCAGTG ATCGCCCATT CGCCCGACGG CGAATTCGAC
CTTGAGCATT TGAAGCGGCT CGCGGCGCAA TGGCCCGGCC TCGAAGGCAT GGATCTCGTG
CCGAGCGTCG CCTCGACGCA GCGTTACGAA TGGAGCCAGA CCCCCTGGAC GCAGGCGAAC
GGCTATGGCT CCGCCGAGGG CGGCAAGTTC AAGGTCGTCG CCATCGACTA TGGCGTCAAG
AGCACCATCC TGCGGCTCCT CACCGACGCC GGCTGCGACG TCACCGTCGC GCCCTCGACC
GCGACGGCGG CGGAAATCCT CGCGCTGAAG CCGGACGGCA TCTTTCTGTC GAACGGTCCG
GGGGACCCGG CCGAGACCGG CAAATACGCC GTTCCGGTCA TCAAGGCGCT GCTCGACGAG
AAAATCCCGA CCTTCGGCAT CTGCCTCGGC CACCAGATGC TGGCTCTCGC CCTTGGCGGG
CGAACCGTCA AAATGCGCCA GGGCCATCAT GGCGCGAATC ATCCGGTGCA GGACTTCACC
ACTGGAAAGG TCGAGATCGT CTCGATGAAT CATGGCTTTG CGGTCGACCC TTTGAGCCTT
CCCGAAAATG CGCGCGAGAC GCATCGCTCG CTGTTCGATG GCTCCAATTG CGGTTTGGAG
CTGACCGACC GGCCGGCTTT TTCGGTCCAG CATCATCCCG AAGCCTCGCC CGGCCCGCGC
GATAGTCATT ATTTGTTCCG CCGTTTTGCC CAGATGATGG AAAAGTCAGC GGGTTAG
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| Protein sequence | MILDQDKAPT PVWPAPRPTA LLVLANGLVL EGVGLGATGE AVGEVCFNTA MTGYQEILTD
PSYAGQIVTF TFPHIGNVGA NDEDIETSNP AAAAGVRGAI VHAPITGPSN YRSTRHFDGW
LKSRGIIGLC GVDTRALTAL IRDSGMPNAV IAHSPDGEFD LEHLKRLAAQ WPGLEGMDLV
PSVASTQRYE WSQTPWTQAN GYGSAEGGKF KVVAIDYGVK STILRLLTDA GCDVTVAPST
ATAAEILALK PDGIFLSNGP GDPAETGKYA VPVIKALLDE KIPTFGICLG HQMLALALGG
RTVKMRQGHH GANHPVQDFT TGKVEIVSMN HGFAVDPLSL PENARETHRS LFDGSNCGLE
LTDRPAFSVQ HHPEASPGPR DSHYLFRRFA QMMEKSAG
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