Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1563 |
Symbol | |
ID | 7092070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 1690762 |
End bp | 1693026 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643464890 |
Product | PTSINtr with GAF domain, PtsP |
Protein accession | YP_002361875 |
Protein GI | 217977728 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.547651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATGGCG CACTCGGCGG ACCGCGTCTG CTGCTGCGCC GGCTTCGCGA AGTCATGGCG GAGCCGGTCA GCCCGCAGGC TCGGCTCGAC AAGATCGTCG TGCATATTGC GGCGAACATG GTCGCCGAAG TCTGTTCGGT CTATATCCTG CGCGCCGACG GAAGGCTCGA GCTCTATGCG ACCGAAGGCC TCAATCGCGA GGCGGTTCAT AACACCACCA TGCGCGCGAG CGAGGGTCTC GTCGGCCTGA TCGCCGAGAC CGCCGAGCCG CTGGCGCTCG CCGACGCGCA AAATCATCCC TCCTTCTCCT ATCGTCCGGA GACAGGCGAG GAGATCTATT CCTCCTTCCT CGGCGTGCCG ATCCTGCGCG GCGGCAATAC GCTCGGCGTG CTCGACGTCC AGAACAGGGC GCGGCGCGTC TATACCGACG AGGAAATCGA GGCGCTGCAG ACGACGGCGA TGCTGCTCGC CGAAATGATC GCATCCGGCG AATTGCAGTC GCTCGCCGAG CCTGGCGCCG ACATCGCGCT GGGACGCCCG CGTACGCTCA AGGGATCGGC CTTGGCCGAA GGCGTCGGCC TCGGCCATGT CGTGCTGCAT GAGCCGCGCA TCATCGTCAA GCAGCTCATC GCCGAAGACA TGAAGCAGGA GATGGCGCGG CTCGACAAGG CCATCGGCGA GATGCGGGAA TCGATCGACA GCCTGATCGA AGCCGGCAAT ATGGGGCCGG GCGAGCACCG CGAGGTGCTC GAAACCTTCC GCATGGTCGC GCATGACCGC GGCTGGCTGC GCCGCCTGCG CGAGGCCGTC GCCACCGGCC TCACCGCCGA AGCGGCCGTC GAGCGCGTCC AGAACGACGC CCGCGCAAAG CTGCAGCGCC ATCCCGAGCC CTCGATGCGC GAGCGGCTGC ATGACCTCGA CGACCTCGCC AACCGGCTGC TGCATCAGCT GACCGGGCAG AGCTATGTCG CGACGCATGA CGAATTGCCG CATAACGCCA TCATCGTCGC GCGCTCGATG GGGCCCGCCG CCCTGCTCGA ATATGACCGT TCGAAATTGC GCGGCCTCGT GCTGGAGGAC GTCGGCGGCG GCAGCCATGT CGCGATCGTC GCCAGAGCGC TCGGCATCGC CGCAGCTGGC GACGTCGCCA ATATCCTCGA CTTCGTCGAA CCTGGCGACG CCATCATCGT CGACGGCGTC TCCGGCGAGG TGCATGTGCG CCCGGCGCCC GACGTCGAGC ACGCCTATGC CGAGAAGGCG CGGCTCCGCG CCAAGCGGCA GGAGCAATAT CACAAGCTGC GCGACCTGCC CGCCGTCACT CGGGACGGCG TCGAGATCGA GCTGCATATG AACGCTGGCC TCCTCGTCGA TTTGCAGCAT CTCGCCGAAA CCGGCGCGCA GTCCGTCGGC CTGTTCCGCA CCGAATTGCA GTTCATGCTC GCCTCGCGCT TTCCGAAAAT GAGCGAGCAG GAACGGCTTT ATCGCTCGGC GCTTGACCTC GCCGCGGGCA AATCGATCAC CTTCCGCACG CTCGATATCG GCTCCGATAA GGTGCTGCCC TATATGACGC AGGTCGAGGA GGAAAACCCG GCGCTTGGCT GGCGCGCCAT CCGCATCGGC CTCGACCGGC CTGGGCTTCT CCGCACGCAA TTGCGCGGCT TCTTACGCGC GGGAGCGGGG CGCCCCCTGC GCATCATGTT TCCGATGATC GCGAGCCTCG CCGAACTGGA AGCGGCGCGG GCGATCCTCG ACCGCGAAAT CGCCCAGCTC AAACGCCACC GCCGCGAACC GCCCTCCGAG CTCAAGGTCG GCGTCATGGT CGAAGTGCCG TCGCTGCTGT TCGAAATCGA CGACATCTGC CGCAGCGTCG ACTTCATCTC CGTCGGCTCG AACGATCTCA TGCAGTATTT TTTCGCTGCG GACCGCGACA ATAAGCGCGT CTCCAGACGG TTCGATCCGC TCGCGCCGCC TTTTTTGCGC GCCTTGAAGC AGATCGCCGA CGCCGCGCGC GCCGCCTCGA CGCAGTTGAC GCTGTGCGGC GAAATGGGAG GCAAGCCGCT TGAAGCCCTG GCTTTGCTCG CGATCGGCTA TCGCAGCCTG TCGATGTCGG CCGCCGCGAT CGGGCCGGTC AAGGCCATGA TCCTGTCGGC GGATTTGCGT CTCGCCCGCG CCCTCGTGAT GGCCCGGCTG AACGAAAAAT CGACCGGATC AAGTCTGCGC GAAGGGCTGG CCCAATTCGC CGAGGATCAT GGGATCCCGA TTTAG
|
Protein sequence | MYGALGGPRL LLRRLREVMA EPVSPQARLD KIVVHIAANM VAEVCSVYIL RADGRLELYA TEGLNREAVH NTTMRASEGL VGLIAETAEP LALADAQNHP SFSYRPETGE EIYSSFLGVP ILRGGNTLGV LDVQNRARRV YTDEEIEALQ TTAMLLAEMI ASGELQSLAE PGADIALGRP RTLKGSALAE GVGLGHVVLH EPRIIVKQLI AEDMKQEMAR LDKAIGEMRE SIDSLIEAGN MGPGEHREVL ETFRMVAHDR GWLRRLREAV ATGLTAEAAV ERVQNDARAK LQRHPEPSMR ERLHDLDDLA NRLLHQLTGQ SYVATHDELP HNAIIVARSM GPAALLEYDR SKLRGLVLED VGGGSHVAIV ARALGIAAAG DVANILDFVE PGDAIIVDGV SGEVHVRPAP DVEHAYAEKA RLRAKRQEQY HKLRDLPAVT RDGVEIELHM NAGLLVDLQH LAETGAQSVG LFRTELQFML ASRFPKMSEQ ERLYRSALDL AAGKSITFRT LDIGSDKVLP YMTQVEEENP ALGWRAIRIG LDRPGLLRTQ LRGFLRAGAG RPLRIMFPMI ASLAELEAAR AILDREIAQL KRHRREPPSE LKVGVMVEVP SLLFEIDDIC RSVDFISVGS NDLMQYFFAA DRDNKRVSRR FDPLAPPFLR ALKQIADAAR AASTQLTLCG EMGGKPLEAL ALLAIGYRSL SMSAAAIGPV KAMILSADLR LARALVMARL NEKSTGSSLR EGLAQFAEDH GIPI
|
| |