Gene Msil_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1538 
Symbol 
ID7092044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1656006 
End bp1656824 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content68% 
IMG OID643464864 
Producthypothetical protein 
Protein accessionYP_002361850 
Protein GI217977703 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACGG CTCCGAAGCG GCGCGCGGTC GTTCCCGCGC CCGCGGCGCC GCCGGGGCCT 
CCAACGAAAC ATCCGACGCT TGGCGAGCCA TCGGCGCGCT GGACCTATTT GACGGCGAAA
GGCGAGCTGG CCGGGTTCGT TTGCCGCTTC GACAGAAAAG GCGGCAAGCA GTTTCGGCCG
CTCGTGTTTT TCGAGGAAGA CGACGGCGCG CGCGCTTGGC GCTGGGAGGC CTGGTCGGCT
CCCCGCCCGC TCTATGGGCT GGAACGCCTC GCGCAACGGC CCAGCGCGCC CGTCCTTCTG
TGCGAGGGTG AAAAGGCGGC GGACGCGGCC GGCAAGCTTC TGCCAGGGCA TGTCTGCATC
ACCTCGCCAA ACGGCGCGAA GTCGGCCGCG AAGGCCGACT GGGGATCGCT TGCCCGGCGC
GATGTGATGA TCTGGCCCGA CGCAGACGAA GCGGGCGCCG CCTATGCGCG GGACGTCACA
AAGCTGGCCT TGGCCGCCGG CGCAAAAGCC CTTGCGCTCC TATCTCCGCC AGACGACGTC
GACGAGGGAT GGGACGCGGC CGATGCTTTG GCGGAGGGCT GGACGAGCGA AAAGACGCTC
GCGCTCGTTG ACGCCGCAAA GGCTGTTGGC GGCGCGACAC AAGCGAAGCA AGCGAGTGAA
GGCAAGGCTC CGCGCCGGCG GCCGCAACGC GACGCGCTCA TGGCGCTGAC GCAATTTTGC
GCGTTCTGGC ACGGCGCCGA CTACGAGGCC TTCGCGACCG TGCCGGTCAA CGGCCATAAT
GAAAATTGGC CGGTGCGATC GCAGGCGTTC AAGCGCTAG
 
Protein sequence
MGTAPKRRAV VPAPAAPPGP PTKHPTLGEP SARWTYLTAK GELAGFVCRF DRKGGKQFRP 
LVFFEEDDGA RAWRWEAWSA PRPLYGLERL AQRPSAPVLL CEGEKAADAA GKLLPGHVCI
TSPNGAKSAA KADWGSLARR DVMIWPDADE AGAAYARDVT KLALAAGAKA LALLSPPDDV
DEGWDAADAL AEGWTSEKTL ALVDAAKAVG GATQAKQASE GKAPRRRPQR DALMALTQFC
AFWHGADYEA FATVPVNGHN ENWPVRSQAF KR