| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1454 |
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| Symbol | |
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| ID | 7091797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1572487 |
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| End bp | 1575636 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643464793 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002361779 |
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| Protein GI | 217977632 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTT TTTTCATCGA CCACCCGGTC TTCGCCTGGG TGCTGGCCAT CATCGTGATG
CTGGCCGGCG CCGTCGCCGT CCTGACGTTG CCGATCGCGC AATATCCCAG CATCGCCCCG
CCGGCGGTCT CCATCAGCGT CACCTATCCG GGCGCGTCGG CCGAGACGGT GCAGAGCACC
GTGGTGCAGG TGATCGAACA GCAGCTCAGC GGCCTCGACC ATTTGCTGTA TTTCTCGTCC
GAGAGCGACA AGGATGGCAG CATCACCATC ACTCTCAGCT TCGACCAGGG CACGAACCCG
GATATCGCCC AGGTGCAGGT GCAAAACAAG CTGCAACTGG CGCAGCCGCG CCTGCCGCAG
GCGGTGCAGC AACAGGGCAT CCAGGTGGCG AAAGCCACGA AGAACTTCCT TGTCGTGGTC
GGCTTCGTAT CGACGGACGG GGCGATGACC TCCGCCGATC TCGGCGACTT CATCGCGTCC
TCGATCCAAG ATCCGATCAG CCGGACCCCC GGCGTTGGCG ATTACCAGCT TTTCGGCTCG
CAATACGCCA TGCGCATCTG GCTCGATCCA GCCAAACTGA ACAATTACGC CCTGACGCCT
GGCGACGTCA GCGCGGCCAT CCAGGCGCAG AATGTCCAGG TGGCGGCCGG CGAACTCGGC
GGGTTGCCCG CCGTCAAGAA CCAGCAGCTC AACGCGACCA TCATCGGGCC GTCCTATCTG
CAGACGCCGC AGCAATTTGG CGAGATTTTG CTGCGGGTCG AGCCGACCGG CGCAAAAGTC
CTGCTCCGCG ACGTGGCGCG GATTGAACTG GCCGGCGAAA GCTATTCCGT CGACACCAAA
TACAATGGGC GTCCGGCTTC AGCCCTGGCG GTGAAGCTCG CCAGCGGGGC CAACGCGCTG
GACACGGTGA AGGCGGTGCG CGCGACCATC GAACAGCTGC GGCCGAACTT CCCGTCTGGG
GTGGAGGCGA TCTATCCATA CGACACCACG CCATTCGTGG AGCTTTCCAT CCATGGAGTG
GTCGAGACGC TCATCGTCGC GGTCGTCCTC GTCTTCCTGA TCATGTATCT TTTTCTACAG
AACCTGCGGG CGACGCTGAT CCCGACGATC GCCGTTCCTG TCGTGCTGCT CGGAACCTGC
GCCATCCTGT CGCTGGCGGG ATTCTCGATC AACAGTCTGA CGATGTTCGG CATGGTGCTC
GCCATCGGTC TTTTGGTCGA CGACGCGATC GTTGTCGTCG AGAATGTCGA ACGCGTGATG
GAGGAAGATC ATCTCTCTCC CAAGGAAGCC ACGCGCAAAT CGATGGACGA GATCTCGGGC
GCGCTGGTCG GCATCGCGCT GGTGCTGACG GCGGTCTTCC TGCCAATGTC GTTCTTCGGC
GGATCCACCG GCGTCATCTA CCGGCAGTTC TCCATCACAA TCGTCTCGTC CATGATCTTA
TCGGTGCTGG TCGCGCTGGT CTTCACGCCA GCCTTGTGCG CGACCATCCT GAAGCGCCCA
AAGGAAGGCG GCAAGCGCGG CTTCTTCGGC TGGTTCAACC GCAATTTCGA TCGCGGCAAC
CGCAGATATG TCGGCGTGGT GAAGCTGGCG ATCGCTCATC CGATTCTATC CATGTTGGCG
TTCGTCGGCG TCACGACCGT GCTGGTTCTC GTGTTCGTAC GCATACCCAG CGGATTTCTG
CCGGACGAGG ACCAGGGCGT GATGTTCGCG CAGGTCGTCG CCCCGCCCGG CGCCACCAGC
ATAAGAACGC AACAGGTTCT GGACGAGGTC TCGGATTATC TGCGCACGGA CGAATCTCAT
AACGTCGAGG GCGTCTTCGA AGTTAACGGA TTCAGCTTCG GCGGACGCGG CCAGAACGCC
GGCCTGATCT TCGTCAAACT GAAGGATTGG AGCGAGCGGC CGGGCGAGCA GAACAAGGTC
CAGGCGATCG CCGGACGCGC CATGGCGCGG TTCGGAGAGA TCAAGGACGC GCGGGTGTTC
GCTTTCGCGC CCCCCGCCGT GCTGGAGCTC GGCAATGCGA CCGGTTTCGA CTTCCAGATC
CTGGACCGCG CCAATCTCGG CCACGACAAG CTGATGCAGG CTCGCAACCA GCTGTTGGCG
GAGGCCGCCA AGGATCAACG GTTGGTCGCC GTGCGACCCA ATGGAATCGA TGACGAACCG
CAATATACCA TCGTCATCGA CAGGGAGAAA GCGAACGCGC TAAGCCTGAG CATCGCCGAC
ATCAACACCA CTCTGTCGGC GGCCTGGGGG TCGGCCTACG TGAACGATTT CATCGATCGC
GGCCGAGTAA AGCGGGTCTA CATGCAGGGC GACAGCCATT CGCGGATGCT GCCCGATCAG
CTCGACAGCT GGTACGTGCG CAACAAGCTC GGCCAGATGG TGAAGTTCTC ATCCTTCGCG
GCAGGGCGCT GGACCTATGG CTCGCCGAAG CTCGAACGGT ATGGCGGCGT CCCATCGATC
GAAATCATGG GTTCGCCGGC GCCGGGCCAG AGCACGGGCG CCGCAATGGA GGCGATGAAG
GAAATCGCCA GCAAGCTGCC GCCGGGATTT GGCTATGATT GGACAGGATT GTCCTACGAG
GAGGTGAAAT CCGGATCGCA GACAGGACTG CTCTACGCCG GCTCGCTGAT CGTCGTCTTC
CTCTGCCTTG CCGCATTGTA CGAAAGCTGG TCGATCCCGG TCGCCGTTCT GCTTGTCGTG
CCGCTTGGCG TCGTCGGCGC GGTTCTGGCC ACCTTCTTCC GTGGACTGAA CAACGACGTT
TATTTCCAGG TTGGCCTGCT GACGACGATC GGCCTCGCCT CAAAAAACGC GATCCTGATC
GTTGAATTCG CCAAGGCGAA TTTCGAGGCG GGCGAGGATC TGGCCGAGGC GGCGGCGATC
GCCGCGCGAG AGCGGCTGCG GCCGATCCTG ATGACCTCGC TGGCCTTTAT TCTGGGCGTG
GCGCCCTTGG CGATCTCCAC CGGCGCGGGC TCCGGCGGCC AGAACGCCAT CGGCACCGGA
GTCGTCGGCG GCATGATCTC CGCCACGGTT CTGGCGATCG TTCTGGTTCC GGTGTTCTTT
GTCGTCGTCT TGCGCCTGTT CAAGGTGAAA CGCTTGAATC ATGAGGAACA TGCGACGGCG
CGGGACCTTC AGCCGGCGAC CGAGCCATGA
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| Protein sequence | MSRFFIDHPV FAWVLAIIVM LAGAVAVLTL PIAQYPSIAP PAVSISVTYP GASAETVQST
VVQVIEQQLS GLDHLLYFSS ESDKDGSITI TLSFDQGTNP DIAQVQVQNK LQLAQPRLPQ
AVQQQGIQVA KATKNFLVVV GFVSTDGAMT SADLGDFIAS SIQDPISRTP GVGDYQLFGS
QYAMRIWLDP AKLNNYALTP GDVSAAIQAQ NVQVAAGELG GLPAVKNQQL NATIIGPSYL
QTPQQFGEIL LRVEPTGAKV LLRDVARIEL AGESYSVDTK YNGRPASALA VKLASGANAL
DTVKAVRATI EQLRPNFPSG VEAIYPYDTT PFVELSIHGV VETLIVAVVL VFLIMYLFLQ
NLRATLIPTI AVPVVLLGTC AILSLAGFSI NSLTMFGMVL AIGLLVDDAI VVVENVERVM
EEDHLSPKEA TRKSMDEISG ALVGIALVLT AVFLPMSFFG GSTGVIYRQF SITIVSSMIL
SVLVALVFTP ALCATILKRP KEGGKRGFFG WFNRNFDRGN RRYVGVVKLA IAHPILSMLA
FVGVTTVLVL VFVRIPSGFL PDEDQGVMFA QVVAPPGATS IRTQQVLDEV SDYLRTDESH
NVEGVFEVNG FSFGGRGQNA GLIFVKLKDW SERPGEQNKV QAIAGRAMAR FGEIKDARVF
AFAPPAVLEL GNATGFDFQI LDRANLGHDK LMQARNQLLA EAAKDQRLVA VRPNGIDDEP
QYTIVIDREK ANALSLSIAD INTTLSAAWG SAYVNDFIDR GRVKRVYMQG DSHSRMLPDQ
LDSWYVRNKL GQMVKFSSFA AGRWTYGSPK LERYGGVPSI EIMGSPAPGQ STGAAMEAMK
EIASKLPPGF GYDWTGLSYE EVKSGSQTGL LYAGSLIVVF LCLAALYESW SIPVAVLLVV
PLGVVGAVLA TFFRGLNNDV YFQVGLLTTI GLASKNAILI VEFAKANFEA GEDLAEAAAI
AARERLRPIL MTSLAFILGV APLAISTGAG SGGQNAIGTG VVGGMISATV LAIVLVPVFF
VVVLRLFKVK RLNHEEHATA RDLQPATEP
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