| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1453 |
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| Symbol | |
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| ID | 7091796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1570961 |
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| End bp | 1572403 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643464792 |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_002361778 |
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| Protein GI | 217977631 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCC GCCGGATCGA GACGGTCGCT ACAGCGGATT CCGCGCCGCT CGCGCGCGCC
CTCAACGGCC GTATCACGCC GTTGAGCCGC GTCGCCGTGG TTCTCGCGAC GAACCTGGCG
GTTGCGCCGC CTGCAACCGC CGAAACGATG TCGAGCGCGC TGGTTCGCGC TTATATCGGC
AATCCGGATA TGAACCAGCA GCGCGCGGGC GTTCGCGCGC AGGACGAGAA TATCCCTCGG
GCCACTTCGG GCTGGCGTCC GCAGGCCAGC GCGACCGGGC AGGTTGGCTA TAATTATCAG
GACTTTCGCC AGCTCGGCAC GCGCCTTAAC GGCAGCACCC TGCCGACGAC GATCGGTCTG
TCGGTCACGC AAAATGTCTT TAACGGCAAC CGCACGCTGA ATTCGGTGCG GCAGGCCGAG
TCGGGCGTTT TCGGCGCCCG CGAGGATCTG CGCAACACCG AGCAGAACGT CCTGCAGAAC
GGCGCGACCG CCTATATGAA TGTGCTGCGC GACACCGCCG TGCTTGAGCT TCGCCGCAAC
AATATCACCG TTCTCGAAGA GCAGCTGCGC CAGACGCGCG ACCGCTTCAA TGTCGGCGAA
GTGACCCGCA CCGACGTGGC GCAGGCGGAA TCGAGCCTGG CGAATTCGCG CTCGGAATAT
TTCGTCGCGC AAGCCAATCT GCAAAACAGC ATCGCCAATT TCCGCCAGAT CATCGGCGTC
GAGCCGACCC GTCTCGAGCC GGCGCGCACC ATCGAGGCCC TGCTGCCGAA GAACATGAAT
AGCGCGGTGG CTCTGGCGCT CGAGGAGCAT CCGGCGATTC AGGCGGTGCT ACATGCGGTC
GATCAGGCGG AATTGCAGGT CAAGCTGGTC GAGGGCGAAC TGGCCCCGAG CGTCAATATC
GTCGGCAGCG TGCAGCGCGC GACCGACTAT CAGGGCATTC GCAACGCGAG CCTCGTCAAC
GGACAGGTGG TCGGACAGAT CTCGGTGCCG ATCTATATGG GCGGCGAAGT CTACGCCCGC
GTCCGCCAGG CGAAGGAGAC GCTGGCGCAA ACGCGGCTGC AGGCCGATCT GCAGCGCGAC
TCCGTCCGCG CCACCGTGGT CTCGGCCTAT GGGCAGCTCG ACTCGTCAAA AGCGGTCATC
CAGTCGGCCA AGGCCGCGGT GAAGGCGGCG GAAATCGCCC TCGACGGCAT CCGCGAGGAG
GCCAAGGTTG GCCAGCGCAC GACCTTCGAC GTCTTGTTCG CACAGCAGAC GCTGCTGAAC
ACGCGCGTCA GCCTCGTCAC CGCCCAGCGC GACCGCGTCG TCGCCTCCTA CAATGTGATG
GCGGCGATCG GCAAGCTCTC GGCGGCCAAC CTCAGCCTGA ACGTCGCCGA ATATGATCCG
ACCGTTCATT TCGAGCAGGT CAAGGACAAG TGGATCGGCC TGCGCACGCC TGACGGACGC
TGA
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| Protein sequence | MAIRRIETVA TADSAPLARA LNGRITPLSR VAVVLATNLA VAPPATAETM SSALVRAYIG
NPDMNQQRAG VRAQDENIPR ATSGWRPQAS ATGQVGYNYQ DFRQLGTRLN GSTLPTTIGL
SVTQNVFNGN RTLNSVRQAE SGVFGAREDL RNTEQNVLQN GATAYMNVLR DTAVLELRRN
NITVLEEQLR QTRDRFNVGE VTRTDVAQAE SSLANSRSEY FVAQANLQNS IANFRQIIGV
EPTRLEPART IEALLPKNMN SAVALALEEH PAIQAVLHAV DQAELQVKLV EGELAPSVNI
VGSVQRATDY QGIRNASLVN GQVVGQISVP IYMGGEVYAR VRQAKETLAQ TRLQADLQRD
SVRATVVSAY GQLDSSKAVI QSAKAAVKAA EIALDGIREE AKVGQRTTFD VLFAQQTLLN
TRVSLVTAQR DRVVASYNVM AAIGKLSAAN LSLNVAEYDP TVHFEQVKDK WIGLRTPDGR
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