| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1412 |
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| Symbol | |
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| ID | 7091752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1524075 |
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| End bp | 1527530 |
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| Gene Length | 3456 bp |
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| Protein Length | 1151 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643464750 |
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| Product | double-strand break repair helicase AddA |
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| Protein accession | YP_002361739 |
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| Protein GI | 217977592 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCG CCGCGATTTC GCCGCAGACG CTGCAAAAGC AGCGCGAAGC CTCCGACCCC
GCCGCCTCGG TCTGGGTCTC CGCCAACGCC GGTTCGGGCA AGACCCATGT GCTGGCGCAG
CGCGTGGTGC GGCTGCTGTT GCAGGGAACG CCGCCGTCGA AGATTCTCTG CCTGACGTTC
ACCAAGGCCG CCGCCGCCAA TATGTCCATG CGCGTCTTCA ACACGCTCGC GCGATGGACG
GCGCTCGACG ATGCGGAGCT GAGGCGGGCG ATCGTAGCCA CCGGCGCGCC GTCGCCGGAC
TGGCGCGAGA TGCGCGAGGC GCGAAAGCTG TTCGCGCGTA CGGTGGAGAC GCCGGGCGGG
CTGAAAATCC AGACCATCCA CGCCTTCTGC GAAAGGCTGC TGCATCTCTT TCCGTTCGAG
GCGAATGCGC CTTCGCGCTT CGAGGTCGCC GACGAGGAGC GGCAGGGTGA ACTGCTCGCC
CGCGCCCGCA ACGACGTGCT GGGCAGCGCC GCGGAGGCCG ATCACGAGCT TAAAGCGATC
GTCGATCGAG TCGCGGGAGA ATGTTCCGAA TATGGCTTTG CGACGCTGCT CGAACAGGCG
CTTCGCCTTC GCGCGCGGCT GCGCGAGGCC TGGCCGAAGG ATCACGAGAG CGTTCTGCGC
AAGGCGCTGG ACGTTGCGCC GGGCCGCGAC GTTGCGGCGA TCCGGCAGGA TATGCTGGAG
GGCGGGATCG CGCCTTCGCG CTGGAGCGAA CTGGCGGCCT TTCTCGAAAC GGGAACCAAA
ACCGATTGCG ATAGGGCGGC CGCTTTCCGC GACGCGGCGG CGCGTCACGC CGCTGGCGAC
AGTGAGGGTT GCCGCGACGT CTATCTCCAG ATCTTTTTTA CCGACAAAGG CGAGAAAGCC
AAAAGGCTCC TGACCAGAGG CCTCGCGGCG AAAAATCTCG CGATCGAGGC CGCGCTCTAC
GCGGAACAAG AGCGTCTCGA TCGTCTGCGG GCCGAGGAAA AATCGGCCGC GACGCTGGAG
CGCTCGGCCG CGCTCGGGCG TCTCGTCGAC GCCATCTTCG CGCGCTATCA AAAACTCAAA
TATGAGCGCG TCATCCTCGA CTTCGACGAT CTCGTCGCGA AGACGCTGAC GCTGCTGGAG
CGCTCCGACG CCTCCTGGGT GCTCTACAAG CTCGACGCGG GCATCGACCA TATTCTGATC
GACGAGGCGC AGGATACAAG CGAGGCGCAA TGGCGCATTC TTGAGGGGCT GATGGCCGAT
TTCGCCGTCG GCCATGGCCG CAATCTTGCG CCGCGAACCT TCTTTGCGGT CGGCGACGAA
AAGCAGTCGA TCTTTTCGTT CCAGGGCGCA GCGCCGCATA TGTTTCACGA GATGCAGCGC
AAATTCGAGC GCAAGTTCAT CAACGGCGGC GAGCGTTTCT CGCATGTGCG GCTGACCCAT
TCGTTCCGCT CGGCGGCTGG CGTGCTCGGC GCCGTCGACA GCGTCTTTGG CCGGGCCGAA
AGCCAAAGCG GGCTGGTCGC GCCCGCCGAC GTCTGGATGG GGCATGAGCC GCTAAAAACT
CTTCCGAGCC TTGTCGAGAT CTGGCCCTCG GTTGGAGCGG GCGGCAAGGC GGAAAACAGC
GATTGGCGCC TCCCGCTCGA TTTCCGCGAT GAGAGCGACC CTCCGAGCCG CGTCGCAACG
CGCATCGCCG AAAAAATCGC GGCGCTCATC GAGCCTCGCT CGGGCGAGCG CGTCCATGAC
GGCGAGAGCG GCGTTTTGCG GGCCGTCCGC GCCGGCGACA TTCTCATTCT TGTGCGCACG
CGCGGACCTT TCTTCGAGGC GGTGATCCGG GCGCTGAAGC AAAAGGGCGT TCCGGTCGCC
GGCGCCGACC GGCTGAAGCT TGGCGAACAT ATCGCGGTGC AGGATCTCGT CGCGGCCGGC
CGCGCCGCCC TGCTGCCGGA GGACGATCTC AATCTCGCCG CGGCGCTGAA ATCGCCGCTG
ATCGGGCTCG ACGACGACGA TCTCATCGCC TTGGCGCCGG GGCGTCCCGG CAGTCTTTTT
GCGGCCCTTC TTGCGTCACC CGATTCGCGC TTCAGGCCGG CGCGCGAGAC GCTCGGCCGA
TGGCGCGCGC GCGCCGCCGC GCGGCCCTTC GCCTTCTACG CCAGCCTTCT TGGCGAGGAT
CAGGGCCGGC GCGCCATCGA AGGCCGGCTC GGCGTCGAGG CGGTCGACGC GGTCGACGAA
TTCTTGCGCC TGGCGCTCGC CCACGAGGCC GAGCCCGCGC CTTCGCTCGC CGGTTTTCTC
GCCGATTTCG AGACCGTGCA GCGGGAGGTC CGGCGCGATA TGGAGAGCGG CGGCGACGTC
GTCCGTGTCA TGACGGTCCA TGCCGCGAAG GGGCTTGAGG CCAAAATCGT CTTTTTGCCC
GATACCTGCG GCGGGCTCTC CGCGCAGCAC GATCCAAGCG TCTTTGCGCT GGAGGAAACC
CACCTCGGCG CGGCGCCTGT CGTCTGGTCG CCGCGGAAGG CCGAAGACTG CGACAAGGCG
GCGGCGGCGC GAAAGCGCCT GCGCGAACTT GCCGAGGACG AATATCGCCG CCTGCTCTAT
GTCGCCCTGA CGCGCGCCGA GGAGCGGATC TATATTTGCG GCTTTCACGG CGCCAAAAAG
CCGCCGGAGC TTTGCTGGGC GAATATGATC GAGGCGACGC TCGCGCCGAC CTTGCAGCAG
GCGCCGGCCT TCTGGAATGT GGAGGAATTT GTTCTGCGGC GGCTATCGCC GGGGGCTGAT
CTGGCGGTTC AGGAGACCGC GGCGCCGGTA GAGGGAGGAA GCCTCATCGC TCCCGGATGG
CTGTCGCGCC GGCTCGATCC GCTGGAAGAG CCGGCGGCGC CAATGCGCCC GTCGAGCGCG
CTCGCCGCCT CCGACCGCCG CGCCGACGCC GCGGGACGGC GCGAGGCGCT GCAGCTTGGC
TCGCTTACGC ACATTTTGCT GCAATATCTC CCCGATCAGC CGGTCGAAGC GCGGGCGCGC
GCGGGGCTGG CCTATCTCGC CGTTCGGGCG AAGGGTCTCG ACGAAGCGGC CCATGAACGT
CTCCTGCAAG CCGCCTTGGC GGTCATCGCC GCGCCGCAGC TTGAGCCCTT GTTCGGTGCG
GGCTCCAGGG CGGAGGTCGC CGTCGCCGGC AAGATCGCGC TGCCGGGCGG AGCTTCGGTC
GACGTCATCG GCCGGATCGA TCGGCTGGGG CTGTCGGAGG GCGAGGTTTG GGTCGCCGAC
TTCAAGACCG GAGCGCCGCC AGCGCCTGGC GAGGTCCCGC AATCCTATCT GACGCAGATG
GCGCTCTACC GCGCGGCGCT GCGGCCGCTT TGGCCGGAAC GCCGGCTGCG CATGATTTTG
ATCTTTACGG AAGGCCCGCA AATCATTGAG CTCGCCGAAG CAGCCCTCGA CGCGGCGCTG
GCTGCTGTCG CCGCTGCGAA ACGCCCGGCT CCTTGA
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| Protein sequence | MDLAAISPQT LQKQREASDP AASVWVSANA GSGKTHVLAQ RVVRLLLQGT PPSKILCLTF
TKAAAANMSM RVFNTLARWT ALDDAELRRA IVATGAPSPD WREMREARKL FARTVETPGG
LKIQTIHAFC ERLLHLFPFE ANAPSRFEVA DEERQGELLA RARNDVLGSA AEADHELKAI
VDRVAGECSE YGFATLLEQA LRLRARLREA WPKDHESVLR KALDVAPGRD VAAIRQDMLE
GGIAPSRWSE LAAFLETGTK TDCDRAAAFR DAAARHAAGD SEGCRDVYLQ IFFTDKGEKA
KRLLTRGLAA KNLAIEAALY AEQERLDRLR AEEKSAATLE RSAALGRLVD AIFARYQKLK
YERVILDFDD LVAKTLTLLE RSDASWVLYK LDAGIDHILI DEAQDTSEAQ WRILEGLMAD
FAVGHGRNLA PRTFFAVGDE KQSIFSFQGA APHMFHEMQR KFERKFINGG ERFSHVRLTH
SFRSAAGVLG AVDSVFGRAE SQSGLVAPAD VWMGHEPLKT LPSLVEIWPS VGAGGKAENS
DWRLPLDFRD ESDPPSRVAT RIAEKIAALI EPRSGERVHD GESGVLRAVR AGDILILVRT
RGPFFEAVIR ALKQKGVPVA GADRLKLGEH IAVQDLVAAG RAALLPEDDL NLAAALKSPL
IGLDDDDLIA LAPGRPGSLF AALLASPDSR FRPARETLGR WRARAAARPF AFYASLLGED
QGRRAIEGRL GVEAVDAVDE FLRLALAHEA EPAPSLAGFL ADFETVQREV RRDMESGGDV
VRVMTVHAAK GLEAKIVFLP DTCGGLSAQH DPSVFALEET HLGAAPVVWS PRKAEDCDKA
AAARKRLREL AEDEYRRLLY VALTRAEERI YICGFHGAKK PPELCWANMI EATLAPTLQQ
APAFWNVEEF VLRRLSPGAD LAVQETAAPV EGGSLIAPGW LSRRLDPLEE PAAPMRPSSA
LAASDRRADA AGRREALQLG SLTHILLQYL PDQPVEARAR AGLAYLAVRA KGLDEAAHER
LLQAALAVIA APQLEPLFGA GSRAEVAVAG KIALPGGASV DVIGRIDRLG LSEGEVWVAD
FKTGAPPAPG EVPQSYLTQM ALYRAALRPL WPERRLRMIL IFTEGPQIIE LAEAALDAAL
AAVAAAKRPA P
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