Gene Msil_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1386 
Symbol 
ID7091724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1497396 
End bp1498196 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID643464724 
ProductLamB/YcsF family protein 
Protein accessionYP_002361713 
Protein GI217977566 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.624042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAC CGCAAGGCGA AAGCGTTAGT CTTTCGGTCG ATCTCAACTG CGATTGCGGC 
GAGGGCTTCG GTCCCTACGC GATGGGCGAT GACGCCGCGA TGCTGGAGAT CGTGTCGAGC
GCCAGCGTCG CCTGCGGCTT TCACGCGGGC GATCCGCAGA TCATGGCCGC CGTCTTCGCG
ACCGCCAGGG AGAAGGGCGT CGCGCTCGGC GCCCATCCCG GCTATCCCGA TCTCTGGGGT
TTTGGCCGGC GCCCGCAACA ATTCAGCCTT GGCGAACTCG AGCGCCTGAT CGCCTATCAG
ATCGGCGCGG CGCTCGGGGT CGCGGCCTTG GCCGGATGCC GCATCTCCTA TGTCAAGATT
CACGGCGCCT TGAGCAATCT CGCCATGGTC GAGCGCGACG TCGCGCGCGC CCTCGCCCAC
GCAACGAAGG CAGTCGATCG CGGCCTCTCC TTTCTCGCCA TAGCCGGCAC GCCGCTTGAG
ACAGAGGGCG CCGCTGCGGG TCTTGACGTC GCGCGCGAGA TTTACGCTGA CCGCGCCTAT
ACCGATGAGG GCCTGCTCGC GCCGCGCGCG GCGCCGGGCG CCGTGCTGAC CGACAAGGAC
GCAATCGCCG CCCGCGTTCT CGCCATGATC GGGGAGGGGG CGATCATCGC GCAATCGGGA
AAACGGATCG CGGCGGCCAT CGATTCCATC TGCGTGCATG GCGATCATCA CGGCGCCGTC
GCGACAGCGA AGCAGGTGCG GACGCGCCTC GAGGCGAAGG GAATCCGCAT CGCGCCCTTT
GCGGCTCCGG CTCAAAAATG A
 
Protein sequence
MSGPQGESVS LSVDLNCDCG EGFGPYAMGD DAAMLEIVSS ASVACGFHAG DPQIMAAVFA 
TAREKGVALG AHPGYPDLWG FGRRPQQFSL GELERLIAYQ IGAALGVAAL AGCRISYVKI
HGALSNLAMV ERDVARALAH ATKAVDRGLS FLAIAGTPLE TEGAAAGLDV AREIYADRAY
TDEGLLAPRA APGAVLTDKD AIAARVLAMI GEGAIIAQSG KRIAAAIDSI CVHGDHHGAV
ATAKQVRTRL EAKGIRIAPF AAPAQK