| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1204 |
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| Symbol | |
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| ID | 7092277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 1289855 |
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| End bp | 1290577 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643464545 |
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| Product | pyrimidine 5'-nucleotidase |
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| Protein accession | YP_002361535 |
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| Protein GI | 217977388 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.00476471 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCGGCGGC GCGCGCGCGT CGCCGATCTG TTCGCGCAGA AGGACATCTG GGTCTTCGAT
CTCGACAACA CGCTCTATCC CGCCGACAGC GACCTATGGC CGAAGATCGA CGCGCGCATC
ACTTTGTTCA TGTCGCATCT CTTCGGCCTC GACGGCATGT CATCGCGCGC GCTGCAAAAA
TATTATTATG AGCGCTATGG CACGACCCTG CGCGGCCTGA TGGAGGAGCA CCGCATCAGC
GCCGAGGAAT TTCTCGATTT CGCGCATGAT ATCGACCGCT CCGGCCTAAA ACCCAACCAT
TCGCTGGCGA GCGCGATTCT CGCGCTGCCC GGCCGCAAGC TGATCCTGAC CAATGGCTCG
CGCGACCATG CGCTGCGCAC CGCGCAGGCG CTCGGAATCG ACGAAATGTT CGAGGATATT
TTCGACATCG TCGCGGCCGA CTTCACGCCA AAGCCCGCCG CTGAAACCTA CGAGCGCTTC
TTCGACAAGC ATGGCGTCGA CCCCGCCCGT TCGGTGATGT TCGAGGATCT CGCCCGCAAT
CTGATCGTGC CGCATGCGCG CGGCATGACC ACGGCGCTGG TGGTGCCAAA ACCCGGGCAG
ATCGACCACC GCGAGGCCTT CGAGATGGTG AGCGAGGCGG CGCCACCGCA TATCGACTTC
ATCACGGCGG ACCTCGAAGC CTTTCTCGTC GACATCGTCG CCGGCGCGAA GCCGAGCGCC
TAG
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| Protein sequence | MRRRARVADL FAQKDIWVFD LDNTLYPADS DLWPKIDARI TLFMSHLFGL DGMSSRALQK
YYYERYGTTL RGLMEEHRIS AEEFLDFAHD IDRSGLKPNH SLASAILALP GRKLILTNGS
RDHALRTAQA LGIDEMFEDI FDIVAADFTP KPAAETYERF FDKHGVDPAR SVMFEDLARN
LIVPHARGMT TALVVPKPGQ IDHREAFEMV SEAAPPHIDF ITADLEAFLV DIVAGAKPSA
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