Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1172 |
Symbol | |
ID | 7092245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 1259405 |
End bp | 1260649 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643464513 |
Product | putative transmembrane protein |
Protein accession | YP_002361503 |
Protein GI | 217977356 |
COG category | [S] Function unknown |
COG ID | [COG3174] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0696977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTGGT TCGCGCCGCC TCTTTCCAGC TTCGCCGTCG CGCTTGGTCT CGGATTGCTG ATCGGCCTTG AGCGCGAACG CAGCAAGGGC GTCGGCCCGT CGCGCGGCCC CGCAGGCATC CGAACCTTCG CAGTCGCCTC CCTGTTCGGC GCCGTCGCCT TTCACATCGG CGGCCTGTTT CTGCTGGCGC TCGCCGCCGT CTGCGTTGCG GGCCTCGTCG CCGTGTCCTA TCGGCGGACA TCCACCTCCG ATCCGGGCCT CACCACCGAA ATGGCGCTGG CGTTCATGCC GATCCTGGGC GCGCTCGCCG TCGCCGACGT CCGACTCGCC GCCGCCGTCG GGGTCGTCGT CGCGATCCTT CTCGCCGCCA AGATTCCCCT CCACGCCTTT GTAACGAAGG TTTTAAACGA AGCTGAAGTG AAGGACCTGC TTGTCTTCGC CGCAGCGACG CTGGTGATCT TTCCGCAGCT CCCGGATCGC TATATGGGGC CGTTCGACGC GCTCAATCCG CGATCGATCT GGCTCCTCGT CATCCTTGTC CTGACCATCG GCGGCTTCGG CTATATCGCC AAGCGCGCGC TCGGCGCGCG TTTCGGCCTT CCGCTCGCCG GGCTCGCCTC CGGATTCGCG TCGAGCACGG CGACGATCGG CGCGATGGCC GGCCTCGCCG CCAAAGAGCC CGCCTTGCTG CGGCCGGCGG TCGCCGCCGC GGTTCTGTCA ACCATCGCGA CATTCATCCA GTTGGCTGTG TTGCTTGCGG CGACCAGCGC GCCAACGCTC GCGGCGCTCG CTCCCGCCCT GATCGCGGGC GGTTGCGCCG CCACGCTTTA CGGCGCCGTT TTCACCGCAC GCGCCTTTAT GACCGGCGAG ACGCAGGATC GCGAACCGGG GCCGGGGCGC GCCTTCAGCA TCAAGACGGC TCTCGCGCTG GCGGCGACGA TGGCTTTGAT GCTCGTCGCG GCGGCGGCGC TGAAGGACTG GCTGGGTGAA GCCGGACTGC TGATCGGAGC GGCGACAGCG GGATTTGTCG ACGCCCATAG CGCCGCCATT TCGGTCGCCT CGCTTGCCGC GTCCGGCAGG CTCGCGCCGC ACGAAGCCGC GCTTCCCATT ATGCTCGGCA TGACGAGCAA CACGGCGGCC AAGATCATTG TAGCGCTCAG CGCCGGCGCG CGCGCCTTCA ACTTGCGGAT CGCGCCGGGC CTCATCCTCG CCCAAGCCGC GGCCTGGGGC GGGTATCTGA TTTAG
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Protein sequence | MLWFAPPLSS FAVALGLGLL IGLERERSKG VGPSRGPAGI RTFAVASLFG AVAFHIGGLF LLALAAVCVA GLVAVSYRRT STSDPGLTTE MALAFMPILG ALAVADVRLA AAVGVVVAIL LAAKIPLHAF VTKVLNEAEV KDLLVFAAAT LVIFPQLPDR YMGPFDALNP RSIWLLVILV LTIGGFGYIA KRALGARFGL PLAGLASGFA SSTATIGAMA GLAAKEPALL RPAVAAAVLS TIATFIQLAV LLAATSAPTL AALAPALIAG GCAATLYGAV FTARAFMTGE TQDREPGPGR AFSIKTALAL AATMALMLVA AAALKDWLGE AGLLIGAATA GFVDAHSAAI SVASLAASGR LAPHEAALPI MLGMTSNTAA KIIVALSAGA RAFNLRIAPG LILAQAAAWG GYLI
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