Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1152 |
Symbol | |
ID | 7093915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 1235530 |
End bp | 1239045 |
Gene Length | 3516 bp |
Protein Length | 1171 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643464493 |
Product | indolepyruvate ferredoxin oxidoreductase |
Protein accession | YP_002361483 |
Protein GI | 217977336 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00216287 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGAACG TGGTGAAAGG CCCGCTCGAC CGCCTCGAGA CGTCCGAAGG CCCCGCCCAC GGGGACGTCG CGCTGTCCGA TAAATATGAT CTCGCCAAGC GCCGGATTTT CGTTTCCGGC CCGCAGGCCG TGGTGCGCCT GCTGCTCCTG CAAAAGGAGC GCGACCGCCG CGCCGGCCTC AACACCGCCG GCTTCATCTC CGGCTATCCC GGCTCGCCGC TCGGCGGCCT CGACCATGGC TTCCTGCGCG CCGGCGCCGC GCTCGAAGCG AGCGACATCA AATTCCAGCC CGGCCTCAAC GAGGATCTCG CCGCGACCGC GATCTGGGGC GCGCAGCAGG CCGAAATGCG CGGCGAGGGC AAGTTCGACG GCGTGTTCGG TCTCTGGTAC GGCAAAGGCC CCGGGGTCGA CCGCTCCGGC GACGTTTTGC GCCACGTCAA TCTGGCGGGC ACATCGAAAT ATGGCGGCGT GGTCGCCCTG ATGGGCGACG ATCATACCGC CGAATCCTCG TCCACCGCGC ATCAGTCGGA ATTCACCTTC ATCGACGTGA TGATGCCGAT CCTCTCGCCG TCCGGCATAC AGGAGATCGT GGATTACGGG CTGCTCGGCT TCGCCCTCAG CCGTTACGCC GGCGTCTGGG TCGGCCTCAA ATGCCTGAAG GACACCGTCG AGGCGACCGC TTCGATCGAC GGATCGCTCG ACCGGATCAG CCCCGTCCTT CCGGATGATT TCGCCCCTCC CCCGGGCGGC CTCAACATCC GCCCGCGCGA CGCCGTGCTC GATCAGGAAA AGCGGCTGCA TTATTTCAAG CGCGACGCCG TGCTCGCCTG GCTGCGCGCC AACCGCCTCA ACAAGATCGT CATTTCCGGC GGCGCCAAGG CGCGGATCGG CGTCATCGCG GCCGGCAAAT CCTATCTCGA CGTGCGTCAG GCGATGGACG ACCTTGGCGT TGACGAGGTG CGCGCCAATG CGCTCGGATT GCGCGTTCTG AAAGTCGGCT GCGTCTTTCC GCTGGAGCCG GCTTCCTTGC GCGAATTCGC GCGCGGCCTC GACCTCATCA TCGTCGTCGA AGAAAAGCGG GCGCTGATCG AGGCGCAGCT GCGGCACGAA CTCTATGGCT CGGCCGACCA GCCGGTCGTG ATCGGCAAGC AGGACGAGGC GGGCCGCTGG CTTTTCCCGG CGCCCGGCGC GCTCGACGCC AATGACATCG CCATCGCCAT CGGCCGCCGG CTGCTGCGCG CCAATCGCAG CGAGGATCTC GAACAACGCG TCGCGGCGCT CGAACGCGCG CAGGCGATGC TCGGCGCGAG CGAGACGCTG CCGGTCCGCA CGCCCTATTT CTGCTCCGGC TGCCCGCATA ACCGCTCGAC GGAAGTGCCG GATGGCATGC GCGCCTATGC CGGCATCGGC TGCCATTATA TGGCGCAGAC GATGGACCGC TCCACCGAGG GCTACACCCA TATGGGCGGC GAGGGCGCGA ACTGGATCGG CGAGGCCCCG TTCTCGACCA GGCCGCACGT CATCCAGAAT CTCGGCGACG GGACCTATAA TCATTCCGGC ATTCTCGCCA TCCGCTTCGC CGTCGCGGCG CAAACCAACA TCACCTACAA AATCCTGTTC AACGACGCGA TCGCCATGAC CGGCGGCCAG CGCCTCGAAG GCGGTCTGAC TGTCGACCGC ATCGCCCGCC AGCTCGCGGC GGAGAATGTC GCGCGGATCA CCGTCGTGAC CGACGAGCCG CAAAAATATC CGGCCGATGT CGAATGGCCG CCGGGGCTCG ATATTTTTCC GCGCGAAAAA CTCGATGAGG CGCAGCGCGC GCTCGCCGAC GTGCGCGGCG TTTCGATCCT GATCTACGAC CAGACCTGCG CCGCGGAAAA GCGGCGCCGG CGCAAACGCG GCGAATATCC GGATCCGCCG AAGCGGGTCA TCATCAACGA ACTCGTCTGC GAAGGCTGCG GCGATTGCGG CGTCAAATCG AATTGCGTCT CGATCCAGCC GCTCGAGACC GAATTTGGCC GCAAGCGGGC GATCGACCAA TCGACCTGCA ACAAGGATTT TTCCTGCGCC GACGGCTTCT GCCCGGCTTT CGTAACGGTG CACGGAGCGC AGCTTAAACG CCCGCCCGAG GCGCAGGCTT TCGACGCCTC AACTCTACCG CGCCCGCGCC TGCCGGAAAT CGGGGCGCGG CCCTATGGCG TGCTTGTCGC CGGCATCGGC GGCTCCGGCG TCGTGACCAT CGGCGCCATT CTCGGCATGG CCGCCCATAT CGAGGGCAAG GGCTGCGGCG CGATCGACAT GGCCGGACTA GCGCAAAAGG GCGGCCCGGT GGTCACTCAC GTCAAGATCG CGGCGCGGCC GGACGATATT CACGCGATCC GGGTCGCCGC CGGCGAGGCC GATCTGCTGC TCGGCTGCGA CCTTGTCGTC ACCGGCTCGG CGCAGGCGCG CGCCGCCATC CGCAAGGGCG AGGCCGGGGT CGTCGTCAAT AGCGCGGAGA TTTTCCCCGG CGATTTTACC CGCGATCCGG ATTTCGACCT GTCGGGAGAG TCGATCCGCC GCGCAATCCG CCAGGCGGCC GGAGACAAAG CCTTTTTCGT TGACGCCAGC GCGACCGCCG CGACGCTTCT GGGAAATTCC ATCGGCGCCA ATATGTTCAT GCTGGGATTT GCCTGGCAGA AGGGCTTCGT GCCTCTCGAG GAAGTCTCGC TGCTGCGCGC GATAGAACTG AATGGCGAAG CCGTCGCGAT GAACCGGCAG GCCTTTTTCT GGGGCCGCCG CGCCGCGGCC GATCCGGCGT CGGTCGCCGC CGCCGCCGCC GCGCTCAACC CGCGCGCGGC GCCCCCGGAG CCGCAATCGC TCGAGACCTT GATGCGCCGG CGGGCCGAAT TCCTGATCGA CTACCAGAAC GCCTCCTATG CCAAGCGCTA TCTGCGCGCC GTGCGGAGGA TCGCCGAGGC GGAGCAGATC AAGGCGCCCG GAAGCGACGA ACTGGCGCAG GCTGTCGCGC GCGGCCTGTT CAAGCTGATG GCGATCAAGG ACGAATATGA AGTCGGCCGG CTCTATTCCG ACGGCAGTTT CGCGCGGCAG GTCGCGGCGA CGTTCGACGG CGACCTCAAA TTTGAGTTCC ATCTCGCCCC GCCCGTGCTG GCGCGCAAAA ACGCCAAGGG CGAATTGCTG AAATCGAGCT ACGGCCCGTG GATGGCGGAG GTCTTCAAGA CGCTGGCGCG GCTGAAAATC CTGCGCGGAA CGCCGTTCGA CCTGTTCGGC TATTCGCGGG AGCGGCGCAT GGAGCGCAAG CTGATCGTCG GCTATGAACG CGCGCTTACC GAGATCGCCG TGACGCTGAC CCCCGACAAT CACGCAATCG CGGTCGAATT CGCCGAACTG CCGCATAAGG TCCGCGGCTT CGGCCACGTG AAGCTGCGCA ACGCCAAGGA CGCGACATTC GAAGGGCTGG AGCTAATGGA CAAGTTCCGG ATGAAGTCCG GCCACATGCA GCTGGCCGCC GAATAG
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Protein sequence | MANVVKGPLD RLETSEGPAH GDVALSDKYD LAKRRIFVSG PQAVVRLLLL QKERDRRAGL NTAGFISGYP GSPLGGLDHG FLRAGAALEA SDIKFQPGLN EDLAATAIWG AQQAEMRGEG KFDGVFGLWY GKGPGVDRSG DVLRHVNLAG TSKYGGVVAL MGDDHTAESS STAHQSEFTF IDVMMPILSP SGIQEIVDYG LLGFALSRYA GVWVGLKCLK DTVEATASID GSLDRISPVL PDDFAPPPGG LNIRPRDAVL DQEKRLHYFK RDAVLAWLRA NRLNKIVISG GAKARIGVIA AGKSYLDVRQ AMDDLGVDEV RANALGLRVL KVGCVFPLEP ASLREFARGL DLIIVVEEKR ALIEAQLRHE LYGSADQPVV IGKQDEAGRW LFPAPGALDA NDIAIAIGRR LLRANRSEDL EQRVAALERA QAMLGASETL PVRTPYFCSG CPHNRSTEVP DGMRAYAGIG CHYMAQTMDR STEGYTHMGG EGANWIGEAP FSTRPHVIQN LGDGTYNHSG ILAIRFAVAA QTNITYKILF NDAIAMTGGQ RLEGGLTVDR IARQLAAENV ARITVVTDEP QKYPADVEWP PGLDIFPREK LDEAQRALAD VRGVSILIYD QTCAAEKRRR RKRGEYPDPP KRVIINELVC EGCGDCGVKS NCVSIQPLET EFGRKRAIDQ STCNKDFSCA DGFCPAFVTV HGAQLKRPPE AQAFDASTLP RPRLPEIGAR PYGVLVAGIG GSGVVTIGAI LGMAAHIEGK GCGAIDMAGL AQKGGPVVTH VKIAARPDDI HAIRVAAGEA DLLLGCDLVV TGSAQARAAI RKGEAGVVVN SAEIFPGDFT RDPDFDLSGE SIRRAIRQAA GDKAFFVDAS ATAATLLGNS IGANMFMLGF AWQKGFVPLE EVSLLRAIEL NGEAVAMNRQ AFFWGRRAAA DPASVAAAAA ALNPRAAPPE PQSLETLMRR RAEFLIDYQN ASYAKRYLRA VRRIAEAEQI KAPGSDELAQ AVARGLFKLM AIKDEYEVGR LYSDGSFARQ VAATFDGDLK FEFHLAPPVL ARKNAKGELL KSSYGPWMAE VFKTLARLKI LRGTPFDLFG YSRERRMERK LIVGYERALT EIAVTLTPDN HAIAVEFAEL PHKVRGFGHV KLRNAKDATF EGLELMDKFR MKSGHMQLAA E
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