Gene Msil_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1106 
Symbol 
ID7093868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1192737 
End bp1193426 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content64% 
IMG OID643464446 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_002361437 
Protein GI217977290 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGACT ATATTTTCGA TCCTCCCGCC GTCGTCGCGC TTGCTGTTGT CTCGGGCGGG 
TTGTTTCCGG TGCGCCGCAT TTTTTGCGTT GGCCAGAACT ATTCCGAGCA CGCGCGGGAG
ATGGGCAGCA ACCCCGACGT CGATCCGCCG TTTTTCTTCA CCAAACCCGC CGACGCCCTG
ATGCCCGATG GCGCGGCGAT CCCCTACCCG CCTGCGACCG CCGATCTGCA GCATGAGGTC
GAACTCGTCG TCGCTTTCTC GGGCGGCGGC CGGGACATCC CCGCCGAGCG CGCCAACGAT
TTGATCTTCG GCTATGCGGT CGGCCTCGAC ATGACGCGGC GCGACCTCCA GGCAGCGGCC
AAGGCGAAAG GCCGTCCCTG GGATATGTCG AAAGCTTTCG ATCATTCGGC GCCCTGCGGC
GCGCTGACGC GAAAGGCCGA CATCGGAACG CTGACCTCGG GCGCCATCGA ATGTAAGGTG
AATGGCGTCA CGCGCCAATC GGCTGACCTT TCCGACATGA TCTGGAACGT CCCGCAGATC
GTGCAATTCC TGTCGGGATT GGTCGAAATC CGGCCGGGCG ACCTCATTTT TACCGGCACG
CCCGCGGGCG TCGGACCAGT CTTGAAGGGC GACGATATCG AGGCGACGAT CGCCGGGCTG
ACGCCGCTGA CGGTCCGGAT CAAAGAATAG
 
Protein sequence
MGDYIFDPPA VVALAVVSGG LFPVRRIFCV GQNYSEHARE MGSNPDVDPP FFFTKPADAL 
MPDGAAIPYP PATADLQHEV ELVVAFSGGG RDIPAERAND LIFGYAVGLD MTRRDLQAAA
KAKGRPWDMS KAFDHSAPCG ALTRKADIGT LTSGAIECKV NGVTRQSADL SDMIWNVPQI
VQFLSGLVEI RPGDLIFTGT PAGVGPVLKG DDIEATIAGL TPLTVRIKE