Gene Msil_1081 details

Gene Information

• Locus tag: Msil_1081
• ID: 7091910
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 1170637
• End bp: 1171290
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643464421
• Product: SNARE associated Golgi protein
• Protein accession: YP_002361412
• Protein GI: 217977265
• COG category: [S] Function unknown
• COG ID: [COG0586] Uncharacterized membrane-associated protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 0.831593
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCTTCG ACCAAATTCC AGAGCTGCTG GCGCGCTACG GCTATGTCGC GGTCTTCTGC 
GGCGTCGCTA TCGAGAGCGC GGGCATCCCT TTTCCGGGCG AGACGCTCCT TGTCACCGGC 
GCAATCCTGT CGGGCCTTCA TGCGGGCGGC GGCGAACTGC ATATTGCGGG CGTGATCGCA 
GCCGCGGCCG CTGGCGCAAT CTTTGGCGAC AATCTCGGCT TCTGGGCCGG GCGCCGTTTT 
GGCTTTCCGC TGCTGGCGCG CTACGGGCCG CTCATTCATC TCGATGAAGG CCGGCTCAAG 
CTCGGGCAAT ATCTTTTCGA AAAACATGGC GGCAAAATTG TTTTCTTCGG CCGTTTCGTC 
GCCGTGCTGC GCGCCTTCGC CGCTTTTCTC GCCGGCGCGA ACCGCTTCAG CCCGTCGCGC 
TTCTTTATGT TCAACGCCGC CGGCGCGCTG GCCTGGGCGA GCCTGTTCGG CGTAATCGGC 
TTCGTGTTCG GGGCCGAGGC CCATCGCATC GCCGGTCCGA TCGGCCTTAT TGGCCTCGTC 
GCGGCGGCGG GTGTTTTTAC TTTCTGCTGG CGCTTCTATA AAAAGAATGA AGCCCGTTTG 
ATTGCGGAGG CGGAAACAGC GTTGCCCGGC CCCATTCAAA CCCGATCCTT TTAA 

 

Protein sequence

MTFDQIPELL ARYGYVAVFC GVAIESAGIP FPGETLLVTG AILSGLHAGG GELHIAGVIA 
AAAAGAIFGD NLGFWAGRRF GFPLLARYGP LIHLDEGRLK LGQYLFEKHG GKIVFFGRFV 
AVLRAFAAFL AGANRFSPSR FFMFNAAGAL AWASLFGVIG FVFGAEAHRI AGPIGLIGLV 
AAAGVFTFCW RFYKKNEARL IAEAETALPG PIQTRSF