Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1009 |
Symbol | |
ID | 7091837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 1095568 |
End bp | 1096950 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643464348 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002361340 |
Protein GI | 217977193 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.00165429 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTCGGGC TGGTTTGCAT CGGCGCCTTC CTCGGCCAGC TGGACGCCAC CATCGTCCAG CTCGCCTTGC CGACTCTCGG CAAAACGTTC GCTGCGCCGC TGCAACAGGT CAGCTGGGTC GCACTGGCCT ATCTCGTCGC CTTCGCGTCA TTTTTGCCGA TCTTCGGGCG GCTGTGCGAG ATCTTCGGCC GGAAGTCGCT TTATCTCGCG GGATACGCTC TGTTCGTCAT CGCAAGCGCT TTATGCGGCC TCTCCACCAG TCTCAGCGAA CTGATCGTCT TCCGCGTTCT GCAGGGGATC GGCGGCTCGC TGCTGGGCGC CAACAGCATC TCCATTCTCG TGGCCGCGAT AGGCCCGAAA CAGCGCGGCA AGGCGCTTGG AATCTTCGCA GCGGCGCAGG CGGTCGGCAT GAGCGCGGGG CCTGCCATCG GCGGCCTGAT CCTCGCCGCG CTCGACTGGC GATGGCTGTT CTGGCTCGCC GCGCCGTTCG GGGCCGCCGC CATCATCGTT GGATGGCTGG CGCTGCCGCA AACGGAGACG ACCGAGCAGG ACATGCGGTT CGATTGGCGC GGCGCCGTCC TGATCGGGCC GGCGCTCATC TTCCTCATCG TGGCGCTCAA CCATCTCTCG GCCCTGACCT CGCCGCTCAC AATGGCTTTC CTTGCTGGGT CGTCGGCGCT GGGCTGGCTC CTCATCCGGC ACGAACGCGC ATCGCCCCGG CCGCTGGTTG ATCTGCTTCT ATTCCGCAGC AGAGCCTTCT GCTGCGGGGC GATCGCCGTC GCGCTGGCTT ACGCCCTGCT CTACAGCATG TTCTTCCTGA TGTCGTTTGC GCTGGAACAT GGCTATGGCG ACAGTCCCGC AGCTGCGGGA CTTCGTCTGG CGATCATTCC GGTCGCGCTC GGGGCGACGG CGCCGTTCAG CGGCGCGCTC AGCGACCGGC TTGGCGCGCC GCTGCTCAGC GCCGCGGGAA TGGCCTGCTG TCTCGTCGCT CTGCTGATGC TGGTCATCAG CGGGCAAGAC TCGGGCGGCG GGCATCTCGT CGCAGCGGCG GCCTTCGCGC TGTTCGGCGT GGGACTGGGC GCATTTATCG CCCCCAACAA TCACAGCACC GTCGAGGCCG CGCCCGCGCG CCTCTCGGGC GAAGCCGGCT CGATGCTAAA CCTGATGCGC GTTCTCGGCG CCAGCCTTGG CGTCGCCGCC GCCACAGCCA GCCTCTCGTG GCGTCTCGAG GACGCAGGCG CCGGCCAGAG CTGGCTTGGC GCCACAGGGC CCTCGCTGCT CCGCGCCGTC GAGGCCAGTC TGATGATACC GGCGGGCCTT GCCGCGCTCG CGGCGGCCGC AGCGCTCTGC GCCGCCTCTC CCCGAGCGCC GAAAACGGCC TAA
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Protein sequence | MVGLVCIGAF LGQLDATIVQ LALPTLGKTF AAPLQQVSWV ALAYLVAFAS FLPIFGRLCE IFGRKSLYLA GYALFVIASA LCGLSTSLSE LIVFRVLQGI GGSLLGANSI SILVAAIGPK QRGKALGIFA AAQAVGMSAG PAIGGLILAA LDWRWLFWLA APFGAAAIIV GWLALPQTET TEQDMRFDWR GAVLIGPALI FLIVALNHLS ALTSPLTMAF LAGSSALGWL LIRHERASPR PLVDLLLFRS RAFCCGAIAV ALAYALLYSM FFLMSFALEH GYGDSPAAAG LRLAIIPVAL GATAPFSGAL SDRLGAPLLS AAGMACCLVA LLMLVISGQD SGGGHLVAAA AFALFGVGLG AFIAPNNHST VEAAPARLSG EAGSMLNLMR VLGASLGVAA ATASLSWRLE DAGAGQSWLG ATGPSLLRAV EASLMIPAGL AALAAAAALC AASPRAPKTA
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