Gene Msil_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0825 
Symbol 
ID7092683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp905025 
End bp905486 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content64% 
IMG OID643464162 
ProductTonB system transport protein ExbD 
Protein accessionYP_002361157 
Protein GI217977010 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02803] TonB system transport protein ExbD, group 1
[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.027584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTAA AACTGACGCA GGCGGACGAC GATCTCGAAC TCAACCACGA GATCAACGTC 
ACCCCCTTCA TCGACGTCAT TCTGGTGCTT TTGATCATTT TCATGGTCGC GGCGCCGCTT
TCGACGGTTG ACGTCAACGT CGATCTTCCG GCCTCGACGG CGCAGGCCGC GCAGCGGCCG
GACAAGCCGC TGTTCTTGAC CGTCAAGCCG GATTTGTCGC TGTCGCTCGG CGAAGAGACC
ATCGCGCGGA CGGCGCTCGG CGCCGCGCTG GATCAGCGCA CCGATCGAGA CAAGGAGACG
CGGATCTTTG TGCGCGCCGA CAAGACCGTG CCCTATGGCG AAGTCATGGA AGCCATGAAT
CTGCTGCGCG CGGCGGGCTA TCTAAAAATC GGCCTCGTCG GCCTCGACGC CGCCTCGGTC
GCGGGCGCGC CGCCGCAAAA GGCGCCAGGC GCTCCGCTGT GA
 
Protein sequence
MAVKLTQADD DLELNHEINV TPFIDVILVL LIIFMVAAPL STVDVNVDLP ASTAQAAQRP 
DKPLFLTVKP DLSLSLGEET IARTALGAAL DQRTDRDKET RIFVRADKTV PYGEVMEAMN
LLRAAGYLKI GLVGLDAASV AGAPPQKAPG APL