| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0778 |
|---|
| Symbol | |
|---|
| ID | 7092636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 855620 |
|---|
| End bp | 856780 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643464116 |
|---|
| Product | tol-pal system protein YbgF |
|---|
| Protein accession | YP_002361111 |
|---|
| Protein GI | 217976964 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0520444 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTTT CAAGGCCTTT CGCAAGCGCC GGCGCCGCGG CCCTTATCTG CCTCGGCTCT
CTCTTCTTCG CGGGCGAGGC GCCCGCCGGC GAGCTGCGCC TTGCGCAAAA CTATCGCGCG
CCGCCGGCCG ACGTCGGCGG CGATCCCTAC GGCCAGCAGG ACGCCGACCC CTCCTCGGTT
CTCGTCCGGG TCGACCGGCT GGAGGCGCAA CTGCGCCAGC TCAACGGCCA GATCGAGCAA
TTGCAGTTCC AGAACCGCAA GCTTGAGGAT CAGCTGCGGA AATTTCAGGA AGACGTCGAT
TTCCGCTTTC AGGATAGCGG GCGCGGCGCT CCGGCAGCCG TCGCCAAGCC GCAAAAGCGC
ACCGACGCCA TCGACGATTA CCTCAGCGGC GACAATCGCT CGGCGGCCTC GGGATCTCCG
GCGACCCCGT CGGCGGGGGC AACGGCAGGA TCGCCGCCGG CGCCGGCGCG CGCGGCCCGG
CGTGGCGACG CCTTCGATCC CTCGGCCGAT CCGGCGGCGC CCGGAGCGCC GCGCCCGCTC
GGCAGCGCCG CCTCCGCCGC CCCGCCTCCC GCCGCTGCGG GGAGCGCCGC GACGGACGCC
GTCGCGGCTC TGGATGACGC CGATGGCGGC GCGCCGGAAG GCCCGCTCAA TCTTGCCGGC
GCAAAATGGC GGGCGCCGGA CGCACAAACC GCGCCCTCCG CGACCCCCGC CCCCTCCAGC
GGCCCGGTGG CGGCGCTGGC GACGCCGAAC GCGCTCGCGC CCGGCGCGGC GCCAATCAAT
CCCGTCAAGG AAGAGTTCGA CGTCGCTTAC GGCTATTTGC GCCAGAAGCA ATATGAGGCG
GCGGAGAAGA GCTTTGCCGC CTTCATCCAG AAAAACCCGA AAAGCCGCTA TAGCGCGGAC
GCCACTTATT ATCTTGGGGA AAGCTTCTTC CAGCGCAGCC GACCGCGCGA AGCCGCCGAG
CAATATCTCA AAATTTCAAC GCAATACGCG ACTTCCGCAC GCGCTCCGGA AGCGATGCTG
CGACTGGGCC AGTCGCTGAA CTCGCTTGGC GCGAAGGAAC AGGCCTGCGC CACCTTCGCC
GAAATCGGGC GGAAATATCC AAACGCGCCG GGCAACGTCA AAGCCGGCGC CGACCGGGAG
GCCAAGCGCG TCCAATGCTA G
|
|---|
| Protein sequence | MRLSRPFASA GAAALICLGS LFFAGEAPAG ELRLAQNYRA PPADVGGDPY GQQDADPSSV
LVRVDRLEAQ LRQLNGQIEQ LQFQNRKLED QLRKFQEDVD FRFQDSGRGA PAAVAKPQKR
TDAIDDYLSG DNRSAASGSP ATPSAGATAG SPPAPARAAR RGDAFDPSAD PAAPGAPRPL
GSAASAAPPP AAAGSAATDA VAALDDADGG APEGPLNLAG AKWRAPDAQT APSATPAPSS
GPVAALATPN ALAPGAAPIN PVKEEFDVAY GYLRQKQYEA AEKSFAAFIQ KNPKSRYSAD
ATYYLGESFF QRSRPREAAE QYLKISTQYA TSARAPEAML RLGQSLNSLG AKEQACATFA
EIGRKYPNAP GNVKAGADRE AKRVQC
|
|---|
| |