Gene Msil_0565 details

Gene Information

• Locus tag: Msil_0565
• Symbol: rplF
• ID: 7091628
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: -
• Start bp: 622259
• End bp: 622792
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643463897
• Product: 50S ribosomal protein L6
• Protein accession: YP_002360899
• Protein GI: 217976752
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 54
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTCGTA TCGGAAAGAA GCCGGTCGCG ATTCCCTCCG GGGTGACGGC CAATGTCGAC 
GGCCAGCTGA TCTCGGTCAA GGGCGGCAAG GGTCAGCTCT CCTTCGCCGC GCCGGAGGAC 
GTCACCGTCG TTCTCGGCGA CGGCGGCATC GAGGTCTCGC CGCGCAATGA GACGAAGCGC 
GCGCGCGCCA TGTGGGGCAT GACCCGCTCC ATGGTGAATA ATCTCGTCGT CGGCGTATCG 
AAGGGGTTCG AGCGCAAGCT CGAGATTACC GGCGTCGGCT ACAAGGCCGC TGTGTCCGGC 
AAAAATCTCC AGCTCTCGCT GGGATTTAGC CATGACGTGA CCTTTCCCAT TCCGGACGGC 
ATTTCGATCG TCGCGGCGAA GCCGACCGAG GTCGCGATCT CGGGAATCGA CAAGCGTCAG 
GTGGGACAGA TCGCATCTGA AATCCGCGCG CTGCGCCCGC CCGAGCCCTA TAAGGGCAAG 
GGCGTCAAAT ACGCTGGCGA ATTCATCTTC CGCAAGGAAG GCAAGAAGAA GTAA 

 

Protein sequence

MSRIGKKPVA IPSGVTANVD GQLISVKGGK GQLSFAAPED VTVVLGDGGI EVSPRNETKR 
ARAMWGMTRS MVNNLVVGVS KGFERKLEIT GVGYKAAVSG KNLQLSLGFS HDVTFPIPDG 
ISIVAAKPTE VAISGIDKRQ VGQIASEIRA LRPPEPYKGK GVKYAGEFIF RKEGKKK