Gene Msil_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0551 
Symbol 
ID7091614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp610550 
End bp611119 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content62% 
IMG OID643463883 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_002360885 
Protein GI217976738 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGAAA AGCCGCTTGT TCGCCGCGAG GCCGTGTTCG AAAGCGGCCC GTTAAAGCCT 
GACAGCCTCG TCGAGATCAG CGGCGAGATC AAATGGTTCG ACGTCGCCAA GGGGTATGGC 
TTCATCACGC CGGATGACGG CGGACCCGAC GTGCTTTTGC ACGTCACGAT TTTGCGGCGC 
GACGGCTATG CGGCCGCCCA TGAGGGGGCG CGAATCGTTT GCGAAGCCGC GCGGCGGGCG 
AAGGGACTGC AGGTCCTGAA AATCAATTCG ATGGATGCGC CGCCGACGCG CCCGTGCGAA 
GGACGGCCGA GAACGCATGT CCATGTCGCC CCGAGCAGCG GCTTCGAGAT CGTCGTCGTG 
AAATGGTTCA ACCGCATGAA AGGATTTGGC TTTCTGACGC GCGGCGATGG CACCGAGGAT 
ATTTTTATCC ATATGGAGAC CTTGCGGCAT TATGGCATCG GCGAATTGCG CCCCGGCGAA 
AGCCTGCTGG TCCGTTTCGG CGACGGACCG AAAGGCCTGA TGGCGGCCGA AGTGCGCCCG 
CTCAACGCCG CCGCGCCTTT GACGCATTAG
 
Protein sequence
MDEKPLVRRE AVFESGPLKP DSLVEISGEI KWFDVAKGYG FITPDDGGPD VLLHVTILRR 
DGYAAAHEGA RIVCEAARRA KGLQVLKINS MDAPPTRPCE GRPRTHVHVA PSSGFEIVVV 
KWFNRMKGFG FLTRGDGTED IFIHMETLRH YGIGELRPGE SLLVRFGDGP KGLMAAEVRP 
LNAAAPLTH