Gene Msil_0471 details

Gene Information

• Locus tag: Msil_0471
• ID: 7091203
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 522216
• End bp: 524093
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643463801
• Product: PQQ-dependent dehydrogenase, methanol/ethanol family
• Protein accession: YP_002360806
• Protein GI: 217976659
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG4993] Glucose dehydrogenase
• TIGRFAM ID: [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 47
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCACAC TTTTAACCTC TGTATCCGTG GCCACGCTCG TGGCCATTTC TCAGTTCGGG 
TTTGCGCCGA TTGCATCGGC GAACGACAAG CTAAACCAAC TGTCGCAGAG CGACGACAAT 
TGGGTGATGC CGGGCAAGGA TTATAAATCC GACAACTTTA GCAAGCTCAC CCAGATCAAC 
GCGAGCAACG TCAAGCAGCT AAAACCGGCC TGGTCCTTCT CGACTGGCGT TTTGAATGGT 
CATGAAGGCG CGCCCCTCGT CGTCGACGGC AAGATGTTTA TCTCGTCGCC CTTTCCCAAC 
ACGACTTTTG CGCTCGATCT CGACGAGCCG GGCGTGATCC TTTGGGAAGA CAAGCCCAAG 
CAAAATCCCG CGGCGCGCGC GGTCGCATGC TGTGACGTCG TCAATCGCGG CCTCGCCTAT 
TGGCCGGGCG ACGGCAAGAC GCCCTCGCTG ATCCTCAAAA CGCAGCTTGA CGGCCATGTC 
GTCGCCTTGA ACGCGGCGAC GGGCGAGGTT TACTGGAAGG TCGAGAATTC CGACATCAAG 
GTGGGCTCGA CGCTCACCAT CGCGCCTTAT GTTGTAAAAG ATATCGTTCT TGTCGGGTCC 
TCAGGCGCCG AGCTTGGCGT GCGCGGATAT GTGACGGGAT ACGACGTGAA AACGGGCGAG 
CAGAAATGGC GCGCTTATGC GACCGGCCCG GATTCGGACC TGCTTCTCGC CGACGATTTC 
AATATCAAGA ACCCCCATTA TGGCCAGAAA GGTCTTGGCA CTTCCACCTG GGAAGGCGAC 
GCCTGGAAGA TCGGCGGCGG CACAAACTGG GGCTGGTACG CATTCGACCC CGACACCAAC 
ATGACTTATT TCGGCACCGG CAACCCGGCG CCATGGAACG AAACCATGCG TCCAGGCGAC 
AATAAATGGA CCATGACGAT TTTCGGCCGT GACGTCGACA CCGGCAAAGC CCATTTCGGC 
TATCAGAAAA CCCCTCACGA CGAATGGGAT TTCGCCGGCG TCAATGTCAT GATGCTGTCC 
GATCAGAAAG ACAAGGACGG CAAGCTGCGC AAGCTTCTGA CCCATCCGGA TCGCAACGGC 
ATCGTCTACA CGCTTGACCG GACCAATGGC GACCTCGTCA GCGCCAACAA GATCGACGAC 
ACCGTCAACG TCTTCAAGCA GGTCGATCTG AAGTCTGGCA CACCGGTCCG CGATCCCGAG 
TTCGGCACGC GTATGGACCA TCTCGCTCGC GAGGTGTGTC CGTCGGCGAT GGGCTATCAC 
AATCAGGGTC ATGACTCCTA CGACGCCAAC AAGCAGCTCT TCTACATGGG CATCAATCAT 
ATCTGCATGG ATTGGGAGCC TTTCATGCTT CCCTACCGCG CAGGTCAGTT CTTTGTGGGC 
GCGACGCTGA ACATGTATCC CGGTCCGAAG GGCGACCGTC AGAACTATGA AGGCCTCGGA 
CAGATCAAGG CCTACAACGC CATCACCGGC AAATTCAAAT GGGAGAAGAT GGAGAAATTC 
GCGGTTTGGG GCGGCACCAT GTCCACGGCT GGCGACCTTG TCTTCTACGG CACGCTCGAC 
GGTTTCATCA AGGCGCGCAA CACCGACACC GGAGAGCTGC TGTGGAAGTT CAAGCTTCCG 
TCCGGCTCCA TCGGATATCC GATTACCTAC ACCCATAAGG GCATTCAATA TGTCGCCATC 
AACTATGGCG TCGGCGGATG GCCGGGCGTT GGCCTCGTGT TCGACCTTCA GGATCCGACC 
GCCGGCCTTG GCGCCGTCGG CGCGTTCAAG AAGCTCGCGC ACTACACCCA GATGGGCGGC 
GGCACGATGG TCTTCTCGCT CGACGGGAAG GGCCCCTATG ACGACGTGAA TCTCGGCGAG 
TTTGCATCAA GCAAATAG 

 

Protein sequence

MRTLLTSVSV ATLVAISQFG FAPIASANDK LNQLSQSDDN WVMPGKDYKS DNFSKLTQIN 
ASNVKQLKPA WSFSTGVLNG HEGAPLVVDG KMFISSPFPN TTFALDLDEP GVILWEDKPK 
QNPAARAVAC CDVVNRGLAY WPGDGKTPSL ILKTQLDGHV VALNAATGEV YWKVENSDIK 
VGSTLTIAPY VVKDIVLVGS SGAELGVRGY VTGYDVKTGE QKWRAYATGP DSDLLLADDF 
NIKNPHYGQK GLGTSTWEGD AWKIGGGTNW GWYAFDPDTN MTYFGTGNPA PWNETMRPGD 
NKWTMTIFGR DVDTGKAHFG YQKTPHDEWD FAGVNVMMLS DQKDKDGKLR KLLTHPDRNG 
IVYTLDRTNG DLVSANKIDD TVNVFKQVDL KSGTPVRDPE FGTRMDHLAR EVCPSAMGYH 
NQGHDSYDAN KQLFYMGINH ICMDWEPFML PYRAGQFFVG ATLNMYPGPK GDRQNYEGLG 
QIKAYNAITG KFKWEKMEKF AVWGGTMSTA GDLVFYGTLD GFIKARNTDT GELLWKFKLP 
SGSIGYPITY THKGIQYVAI NYGVGGWPGV GLVFDLQDPT AGLGAVGAFK KLAHYTQMGG 
GTMVFSLDGK GPYDDVNLGE FASSK