Gene Msil_0434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0434 
Symbol 
ID7093593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp476151 
End bp476861 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID643463764 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002360770 
Protein GI217976623 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.569156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGC TCGTTGTCGA GGACGACAAG GATTTGAATC GGCAGATTGT TTCTGCGCTT 
GAGCGCGCGG GCTACGCCGT CGATCGCGCC TTCGACGGCG AGGAGGGCTG GTTCCTCGGC
GATACCGAGC CATATGACGG CGTCGTGCTC GATCTCGGCC TGCCGGGCAA GGATGGCGTG
ACCGTCCTTT CCGATTGGCG CAAGGCCGGC CGCGTGATGC CGGTGTTGAT CCTGACGGCG
CGCGACCGCT GGGGCGAAAA GGTCAAAGGG TTCGACGCTG GAGCCGATGA TTATGTCACC
AAGCCGTTTC ATATCGAGGA GCTGCTCGCC CGGCTGCGCG CCCTGATGCG GCGCTCCGCG
GGCCATGCCT CGAGCGTGTT CTCCTGCGGT CCGGTCAGTT TCGACGAACG CGGCGGCAAG
GTTTCGGTCG AGGGACAGCC GGTCAAGCTC ACCTCGCATG AATATCGGCT GCTGGGCTAT
TTGATGCATC ATCAGGGCAA GATCGTTTCA CGCGCCGAGA TCGTGGAGCA TCTCTACGAT
CAGGATTTCG ACCGCGACTC CAACACGATC GAGGTTTTTG TCGGACGCCT GCGCAAGAAG
CTCGGGGTCG ACGTCATCCA TACGATGCGG GGCCTTGGCT ATATATTGGC GCCTCCGACG
GCGGACGACG GCGCGGCCGC AAGCCGCTCC GAGCCGCCCG CCGGCCGCTG A
 
Protein sequence
MRLLVVEDDK DLNRQIVSAL ERAGYAVDRA FDGEEGWFLG DTEPYDGVVL DLGLPGKDGV 
TVLSDWRKAG RVMPVLILTA RDRWGEKVKG FDAGADDYVT KPFHIEELLA RLRALMRRSA
GHASSVFSCG PVSFDERGGK VSVEGQPVKL TSHEYRLLGY LMHHQGKIVS RAEIVEHLYD
QDFDRDSNTI EVFVGRLRKK LGVDVIHTMR GLGYILAPPT ADDGAAASRS EPPAGR