Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0375 |
Symbol | |
ID | 7093534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 412802 |
End bp | 413566 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643463707 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002360713 |
Protein GI | 217976566 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.187579 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCGCA AGGACGTCGC TTTTGTCACC GGCGGCAGCT CGGGCATAGG CCGCGCGGTC GCGCTTCGGT TGGCGGGACA AGGTTTTACC GTCGCCGTCA GCGCGCGGCG GGCCGCCGAG CTGGACGCGG TTGCTGCCGA GCACGGGGGA ATCGTCAGCT TTCCGGGCGA TGTCGCCGAC GGCAAGCGCA TGGCTGAGAT CGTTACGGCG GTCGAAGCCG CGCTCGGCCC GATCACGCTC GCGTTTCTCA ATCACGGCGT CTATTTCCCG GCCGAGCGCC AAGGCTTCGA CGCAGAGGTC GTCTGGCGCA CATTTGAGGT CAATGTCGGC GGCGTGATCA ATTGCCTCGC GCCGCTGCTT GCCGCGATGG AGGCGCGGGG CGGGGGACAG ATCGCGATCA CCGCCTCGCT TGCGGGCTAC GGCGGCGTGC CGGGCTCGAT GGCCTATGGC GCGAGCAAAG CGGCGTTGAT CTATATGGCC GAGGTTCTGC GCATGACCTA TGAGCCTCGG GGGCTGAAAA TCCAGATCGT CAATCCGGGC TTTGTGGAAA CGCCGATGAC GGATCACGCC AATTTCGACA TGCCTTTCCT CATGAGCGCG CAAAAGGCGG CGGCCATCAT CTGCGACGGT TTCGACAAGC GCGGATTTGA AATCGCCTTT CCGCGCCGTC TCGCCCTGTT GTTCAAGGCC GCGCGCTTGT TGCCCTATCC GCTTCTGTTG CCGCTGATGC GCCGCCTCGC GCGCCGCGCG CGCACGGATC TTTGA
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Protein sequence | MKRKDVAFVT GGSSGIGRAV ALRLAGQGFT VAVSARRAAE LDAVAAEHGG IVSFPGDVAD GKRMAEIVTA VEAALGPITL AFLNHGVYFP AERQGFDAEV VWRTFEVNVG GVINCLAPLL AAMEARGGGQ IAITASLAGY GGVPGSMAYG ASKAALIYMA EVLRMTYEPR GLKIQIVNPG FVETPMTDHA NFDMPFLMSA QKAAAIICDG FDKRGFEIAF PRRLALLFKA ARLLPYPLLL PLMRRLARRA RTDL
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