| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0323 |
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| Symbol | |
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| ID | 7091542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 361409 |
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| End bp | 362692 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643463657 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_002360664 |
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| Protein GI | 217976517 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0033027 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTCCAT TCACTTACGA GCTGCATGAA ATCTCACACT TCGCCCTCGC CCCGGCCCGG
GCGATGTCGG ACATGGCCCA GCTGTGGCTG AAGAGCCCCG CGAACCTTTT CTCCTATACC
CATCTTGGCA AGAACATGGT GGCGACGGTC GAGCTTTTCG AACGTATGAC GCGCCGCTAC
AGCAAGCCGG GATTTGGCCT CGCCAGCATC CTTGTCGACG GCGACCGCGT CCCGATTGTC
GAGAAAGTCG TTTGGGAAAG CGCCTTTTGC CGGCTGCTCC ATTTCGAGCG CCAATTCGAA
AAGCGCCTCG CAACGCCGCA GTCCAAGCTT TTGATCGTCG CCCCGATGTC CGGCCATCAT
GCCACTCTGC TTCGCGGCAC GGTCGAGGCG TTCCTGCCTT TCTATGATGT CTATATAACG
GATTGGCTCG ACGCCAAGAC GCTGCCGCTG TCGGCCGGCC GCTTCGACCT CGACGATTAT
ATCGACTATC TCATTTCCAT CTGCGCCTTG CTCAGCCGGG AAAACGATGG GCTGCCGCTG
CATACGCTCG GCGTGTGTCA GCCCGCCGTG CCGCTCTTTG CCGCGGTCGC GCTGATGGAG
GGCGAAGACA GCCCGCATAT TCCCGCTTCC ATGACCCTGA TGGGCGGCCC AATCGACACC
CGGCGCAGTC CGACGAAAGT CAATCTGCTG GCTCAAGAGC GCGGCAGCGC CTGGTTCAAG
CGCAATTGCA TCAGCGCCGT GCCGCTCGGC TACCGCGGCG CCGGCCGCGA GGTCTATCCA
GGCTTCCTGC AGCTCGCCGG CTTCATGGGC ATGAATATCG ATCGCCATGT CAGCGCCCAT
CTCGAATTGT TCAGCCATCT CGTCGAGGGC GACGGCGATT CGGCCGAAAA GCACCGCGAA
TTCTATGACG AATATCTGTC CGTTATGGAC CTCACCGCCG AATTCTACCT GCAAACGGTC
GATACTGTTT TCGTCAAGCA CTCCCTGCCC AAGGGCGAGA TGGTTCACCG CGGCCGCGTC
GTCGATTTTT CCGCCGTCCG CCGCGTGGCG CTGATGACGG TCGAAGGCGA GAACGATGAT
ATTTCCGGCG CGGGCCAGAC GCTCGCGGCG CATGACCTCT GTTTCAATCT GCCCGCCGCG
ATGCAGACCG ATTATCTGCA GGAGAAGGTC GGTCATTACG GCGTCTTCAA CGGATCGCGT
TTTCGCAACC AGATCGTGCC GCGCATTCTC GACTTCCACG GCGCCGGAAA ATCCGCCCGC
AATTTGTCGC TGGTCGGCGT CTGA
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| Protein sequence | MPPFTYELHE ISHFALAPAR AMSDMAQLWL KSPANLFSYT HLGKNMVATV ELFERMTRRY
SKPGFGLASI LVDGDRVPIV EKVVWESAFC RLLHFERQFE KRLATPQSKL LIVAPMSGHH
ATLLRGTVEA FLPFYDVYIT DWLDAKTLPL SAGRFDLDDY IDYLISICAL LSRENDGLPL
HTLGVCQPAV PLFAAVALME GEDSPHIPAS MTLMGGPIDT RRSPTKVNLL AQERGSAWFK
RNCISAVPLG YRGAGREVYP GFLQLAGFMG MNIDRHVSAH LELFSHLVEG DGDSAEKHRE
FYDEYLSVMD LTAEFYLQTV DTVFVKHSLP KGEMVHRGRV VDFSAVRRVA LMTVEGENDD
ISGAGQTLAA HDLCFNLPAA MQTDYLQEKV GHYGVFNGSR FRNQIVPRIL DFHGAGKSAR
NLSLVGV
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