Gene Msil_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0208 
Symbol 
ID7090525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp220866 
End bp222083 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content65% 
IMG OID643463542 
Productribonuclease D 
Protein accessionYP_002360551 
Protein GI217976404 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.790947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTTATC TAAAATCCAT GAGCCTGATC ACGACAACTG AGGCCCTGGC GGAGGTCTGC 
CAGAGGCTCG CATCCCATGC TTTCGTCACA GTCGACACGG AATTTCTGCG CGAGACGACG
TTCTGGCCAA AACTCTGCGT CGTGCAGCTC GCCTCGGCCG ACGAGGCTGT GGCGGTCGAC
GCCCTCGCCA GCGGGCTCGA CCTTGCGCCG CTGTTCGAGC TGATGGCCGA TCCCGCCGTC
GTCAAGGTGT TTCACGCTGC CAGGCAGGAT CTTGAAATCG TTTGGAATCT GGCAAAGATC
ATCCCGGCGC CGCTGTTCGA CACTCAGGTC GCGGCGATGG TGTGCGGCTT CGGCGATCAG
GTCTCCTACG GCGATCTCGT CCAGACCGTC TGCAAGGTCT CGCTCGACAA ATCCTCACGC
TTTACCGACT GGTCGCGCCG GCCGCTCCTG CCGGCGCAGG TCGATTACGC CATCGCCGAC
GTCACCTATC TGCGCGATAT TTACGCCATC CTCCAGGACA AGCTGAAAGA GACCGGTCGG
CTCGGCTGGC TCAGCGATGA AATGGCGCTT CTGACGTCGC CCGCAACTTA TGAGCAGCAC
CCGGACAACG CCTGGGAGCG CTTTCGCAAC CGCGTTCGCA AGCCGCGCGA TCTTGGCGTG
CTGATGGAAG TCGCCGGCTG GCGCGAGGCC GAGGCGCAGG CGCGCGACGT GCCGCGCTCG
CGCATCCTGA AGGACGACGT GCTGATCGAG CTCGCCCTGG CCGCGCCGCG CTCGGCCGAC
GCGCTTGGCA ATCTGCGCGC CTTTCCGCGC GGCATGGAGC GCTCGCGCGC GGGCGCCGAA
ATCCTGGCCG CGATCGAACG CGGCCTGGCG CGCGACCCGA AAACGCTGCC AAAGCTCGAG
CGTGACCGCA GGACCGGCGG CAATGGCGCG ACCGTCGAGC TTTTAAAGGT CCTGCTGCGG
CAGATCAGCG AAAGCCATGG CGTCGCCGCG AAAATGATCG CAAATGTCGA GGATCTCGAA
GCGATCGCCG CCGACGACAA CGCCAAAGTC GCGGCGCTGA CCGGCTGGCG GCGCGAACTG
TTCGGCGTGA AGGCGCTGGA GTTGAAACAT GGACGCCTCG CGCTCACGGT CGAGCGCGGA
CGCGTTGTCA TGCTGGAATG GCAGGAGGCT TCTCAGGAAG CGGAGGAGCC GGCCGCGCCC
GAGACGGCGG CAGGCTAG
 
Protein sequence
MLYLKSMSLI TTTEALAEVC QRLASHAFVT VDTEFLRETT FWPKLCVVQL ASADEAVAVD 
ALASGLDLAP LFELMADPAV VKVFHAARQD LEIVWNLAKI IPAPLFDTQV AAMVCGFGDQ
VSYGDLVQTV CKVSLDKSSR FTDWSRRPLL PAQVDYAIAD VTYLRDIYAI LQDKLKETGR
LGWLSDEMAL LTSPATYEQH PDNAWERFRN RVRKPRDLGV LMEVAGWREA EAQARDVPRS
RILKDDVLIE LALAAPRSAD ALGNLRAFPR GMERSRAGAE ILAAIERGLA RDPKTLPKLE
RDRRTGGNGA TVELLKVLLR QISESHGVAA KMIANVEDLE AIAADDNAKV AALTGWRREL
FGVKALELKH GRLALTVERG RVVMLEWQEA SQEAEEPAAP ETAAG