Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0208 |
Symbol | |
ID | 7090525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 220866 |
End bp | 222083 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643463542 |
Product | ribonuclease D |
Protein accession | YP_002360551 |
Protein GI | 217976404 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.790947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTTATC TAAAATCCAT GAGCCTGATC ACGACAACTG AGGCCCTGGC GGAGGTCTGC CAGAGGCTCG CATCCCATGC TTTCGTCACA GTCGACACGG AATTTCTGCG CGAGACGACG TTCTGGCCAA AACTCTGCGT CGTGCAGCTC GCCTCGGCCG ACGAGGCTGT GGCGGTCGAC GCCCTCGCCA GCGGGCTCGA CCTTGCGCCG CTGTTCGAGC TGATGGCCGA TCCCGCCGTC GTCAAGGTGT TTCACGCTGC CAGGCAGGAT CTTGAAATCG TTTGGAATCT GGCAAAGATC ATCCCGGCGC CGCTGTTCGA CACTCAGGTC GCGGCGATGG TGTGCGGCTT CGGCGATCAG GTCTCCTACG GCGATCTCGT CCAGACCGTC TGCAAGGTCT CGCTCGACAA ATCCTCACGC TTTACCGACT GGTCGCGCCG GCCGCTCCTG CCGGCGCAGG TCGATTACGC CATCGCCGAC GTCACCTATC TGCGCGATAT TTACGCCATC CTCCAGGACA AGCTGAAAGA GACCGGTCGG CTCGGCTGGC TCAGCGATGA AATGGCGCTT CTGACGTCGC CCGCAACTTA TGAGCAGCAC CCGGACAACG CCTGGGAGCG CTTTCGCAAC CGCGTTCGCA AGCCGCGCGA TCTTGGCGTG CTGATGGAAG TCGCCGGCTG GCGCGAGGCC GAGGCGCAGG CGCGCGACGT GCCGCGCTCG CGCATCCTGA AGGACGACGT GCTGATCGAG CTCGCCCTGG CCGCGCCGCG CTCGGCCGAC GCGCTTGGCA ATCTGCGCGC CTTTCCGCGC GGCATGGAGC GCTCGCGCGC GGGCGCCGAA ATCCTGGCCG CGATCGAACG CGGCCTGGCG CGCGACCCGA AAACGCTGCC AAAGCTCGAG CGTGACCGCA GGACCGGCGG CAATGGCGCG ACCGTCGAGC TTTTAAAGGT CCTGCTGCGG CAGATCAGCG AAAGCCATGG CGTCGCCGCG AAAATGATCG CAAATGTCGA GGATCTCGAA GCGATCGCCG CCGACGACAA CGCCAAAGTC GCGGCGCTGA CCGGCTGGCG GCGCGAACTG TTCGGCGTGA AGGCGCTGGA GTTGAAACAT GGACGCCTCG CGCTCACGGT CGAGCGCGGA CGCGTTGTCA TGCTGGAATG GCAGGAGGCT TCTCAGGAAG CGGAGGAGCC GGCCGCGCCC GAGACGGCGG CAGGCTAG
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Protein sequence | MLYLKSMSLI TTTEALAEVC QRLASHAFVT VDTEFLRETT FWPKLCVVQL ASADEAVAVD ALASGLDLAP LFELMADPAV VKVFHAARQD LEIVWNLAKI IPAPLFDTQV AAMVCGFGDQ VSYGDLVQTV CKVSLDKSSR FTDWSRRPLL PAQVDYAIAD VTYLRDIYAI LQDKLKETGR LGWLSDEMAL LTSPATYEQH PDNAWERFRN RVRKPRDLGV LMEVAGWREA EAQARDVPRS RILKDDVLIE LALAAPRSAD ALGNLRAFPR GMERSRAGAE ILAAIERGLA RDPKTLPKLE RDRRTGGNGA TVELLKVLLR QISESHGVAA KMIANVEDLE AIAADDNAKV AALTGWRREL FGVKALELKH GRLALTVERG RVVMLEWQEA SQEAEEPAAP ETAAG
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