| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0188 |
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| Symbol | |
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| ID | 7090505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 192430 |
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| End bp | 194004 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643463522 |
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| Product | protease Do |
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| Protein accession | YP_002360531 |
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| Protein GI | 217976384 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.463194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCC CTTTGCTTCC TGGTTCTGAA CAGAATGGCC AATCGCGTCC CGCGCCCCGG
CGCGGCCTTC GGGTCGTCCT GCTTGGCGCC GTGGCGACGG CTGCCTTGAC CGGAGCGCTG
ACGACCGGCT TCGTTTCGCC GCATTCCGCG GTCGCCGAAA CCGCCGCTCC CATCGCGGCG
CAAGCGCCTT CCGCCTCGCC GGTATCCTTC GCCGATGTCG TCGACCATGT TCGCGACGCA
GTCGTTTCGG TCAAGGTCAA GATCACTGAG ACCGCCGACG CGTCGGATGA CGACGATGAC
AACAGCGATT CGCCGCGCCC CGGCCAGATT CCGCGCCTTC AGCCGGGCGA TCCGCTGGAG
CGCTTCTTCA AGCGCTTCGG CCAGCCGGGC ATGCCGCATC CGGGCGGTCC CGGCAAGCCG
CATTCGGCGC AGGCGCAGGG CTCGGGCTTC ATCATTTCGT CGGACGGCTA TGTGGTGACC
AATAACCACG TCGTCGAGAA GGCGACCGAA GTCACGCTCA CCACCGACGA GGGCAAGACC
CTTCATGCGA CGGTCGTCGG CACCGACAAG AAGACCGATC TGGCCTTGTT GAAGATCAAG
GAAGACGGCT CCTATCCTCA CGTGAAATTC TCCAGCGCCA CCCCCCGCGT CGGCGACTGG
GTGATTGCGG TCGGCAATCC GTTCGGCCTT GGCGGAACGG TGACGGCCGG CATCGTCTCG
GCGCGCGGCC GCGACATCGG CGCCGGCCCC TATGACGATT TCCTGCAGAT CGACGCCCCG
GTGAACCGCG GCAACTCGGG CGGCCCGACC TTCAACACGC TGGGCGACGT CGTCGGCGTC
AACACGGCGA TCTTCTCGCC GTCCGGCGGC AGCGTCGGCA TCGGCTTCGC CATCCCCTCG
GAGACGGCGC AGTCGATCAT TGCGAGCCTC AAGGACAAGG GCGCCGTGGC GCGCGGCTGG
ATCGGCGTGC AGATTCAGCC GGTCACCGAT GAGATCGCCG ACAGCCTTGG CCTCAAGTCG
AGCAAGGGCG CACTCGTCGC CGACGCGCAG GACAATTCGC CCGCCAAGGA AGCGGGCATC
AAATCCGGCG ACGTGATCCT CGGCGTCAAT GGCGAGCGCG TCGATGGACC GCGCGATCTC
GCCAAGAAAG TGGCGGCGCT TGGTCCGGGC AAGAAGGCCG ATCTGCTCTA TTGGCACGAC
GGCGCGGAGA AGACCGTAGC GGTGAAGCTC GGCTCGCTCC CCGACGAGAA AGAGGCGGCA
AAGCCGGCGG CGCTGCAGGA TAATTCTGCG CTTGCGGGCC TCGGGCTGAA GCTGGCTCCG
GCGTCTTCCG TGCAAGGCGC GGGCAATGAT GGCGTCGTTG TCGCCGACAT CGATCCCGAA
GGCTCGGCCG CGCAGAAGGG CCTCAGGGTC GGCGATCTCA TCCTCGAGGC CGGCGGCCGC
GCGGTGAGCA AGCCGTCCGA AATTGCGGCG ATTATCGCTG ACGCCAAGAA GGATGGCCGC
AAGGCCGTGC TGCTGCGGGT CAAGAGCGGC GAAGGCACGC GCTTCGTCGC CGTGGCGACC
AACCCCGCTT CCTAA
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| Protein sequence | MAFPLLPGSE QNGQSRPAPR RGLRVVLLGA VATAALTGAL TTGFVSPHSA VAETAAPIAA
QAPSASPVSF ADVVDHVRDA VVSVKVKITE TADASDDDDD NSDSPRPGQI PRLQPGDPLE
RFFKRFGQPG MPHPGGPGKP HSAQAQGSGF IISSDGYVVT NNHVVEKATE VTLTTDEGKT
LHATVVGTDK KTDLALLKIK EDGSYPHVKF SSATPRVGDW VIAVGNPFGL GGTVTAGIVS
ARGRDIGAGP YDDFLQIDAP VNRGNSGGPT FNTLGDVVGV NTAIFSPSGG SVGIGFAIPS
ETAQSIIASL KDKGAVARGW IGVQIQPVTD EIADSLGLKS SKGALVADAQ DNSPAKEAGI
KSGDVILGVN GERVDGPRDL AKKVAALGPG KKADLLYWHD GAEKTVAVKL GSLPDEKEAA
KPAALQDNSA LAGLGLKLAP ASSVQGAGND GVVVADIDPE GSAAQKGLRV GDLILEAGGR
AVSKPSEIAA IIADAKKDGR KAVLLRVKSG EGTRFVAVAT NPAS
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